SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSOPRP00000013210 from Ochotona princeps 76

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSOPRP00000013210
Domain Number 1 Region: 183-251
Classification Level Classification E-value
Superfamily Homeodomain-like 1.28e-19
Family Homeodomain 0.0032
Further Details:      
 
Domain Number 2 Region: 59-123
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.000000000000027
Family LIM domain 0.01
Further Details:      
 
Domain Number 3 Region: 30-57
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.0000492
Family LIM domain 0.013
Further Details:      
 
Weak hits

Sequence:  ENSOPRP00000013210
Domain Number - Region: 120-148
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.0163
Family LIM domain 0.033
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOPRP00000013210   Gene: ENSOPRG00000014466   Transcript: ENSOPRT00000014469
Sequence length 380
Comment pep:known_by_projection genescaffold:pika:GeneScaffold_2625:94221:263614:-1 gene:ENSOPRG00000014466 transcript:ENSOPRT00000014469 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MLDGLKMEENFQSGIETPASFSSLLGRASPKSVCEGCQRVISDRFLLRLNDSWHEQCVQC
ASCKEPLETTCFYRDKKLYCKYDYEKLFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCC
CVCERQLQKGDEFVLKEGQLLCKGDYEKERELLSLVSPAASDSGKSDDEESLCKSAHGTG
KGATEDGKDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVW
FQNQRAKMKKLARRQQQQQQDQQNTQRLSSAQTNGSGNAGMEGIMNPYTALPTPQQLLAI
EQSVYSSDPFRQGLTPPQMPGDHMHPYGAEPLFHDLDSDDTSLSNLGDCFLATSEAGPLQ
SRVGNPIDHLYSMQNSYFTS
Download sequence
Identical sequences ENSOPRP00000013210 ENSOPRP00000013210

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]