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Domain assignment for LOC_Os01g72030.1|13101.m07848|protein from Oryza sativa ssp. japonica 5.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  LOC_Os01g72030.1|13101.m07848|protein
Domain Number 1 Region: 358-390
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.000000119
Family Retrovirus zinc finger-like domains 0.0061
Further Details:      
 
Domain Number 2 Region: 456-554
Classification Level Classification E-value
Superfamily Acid proteases 0.000000657
Family Retroviral protease (retropepsin) 0.045
Further Details:      
 
Weak hits

Sequence:  LOC_Os01g72030.1|13101.m07848|protein
Domain Number - Region: 10-74
Classification Level Classification E-value
Superfamily BAR/IMD domain-like 0.0453
Family FCH domain 0.051
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) LOC_Os01g72030.1|13101.m07848|protein
Sequence length 767
Comment retrotransposon protein, putative, unclassified
Sequence
MSGTSSDEPTLENLAHKLKGMENWYEELMRNSKSYKESTDKHLKTLSESLVKVVDQIEQM
NRSHKQLTENIQNINIGHENIVRRIGLLEAVGEEGVGATAHRHQRYDDEDEEQSVADDEE
EDESVGNRRRCRIRDKDDPLSKVKFTMPSFDGKFEPSVYLDWELAVEQKFSCYDFPDNKK
VKAASSEFTSFASLWWNDICGRGLRPRTWDDMKRTMRSRFVPSYYARDMLNKLQLLRQGS
NSVETYYQEMMIALSRCNLQETEDARISRFYGGLNREIRDILEYKEYNTMNRLFHFACKA
EREVQGRNKHRSSLAGATSTRQSTPRQSTTVVRPPTSTPSHAQETSKNASVQTPAKSATS
VDSTGRTRDITCHRCHGIGHIARDCPNRRALFVNADGEYTSASDCDDEYALAATDHAGGQ
DDEDIEEVHLHPESLDQYPSLIVKLALSAKEKCEEQNQRHNLFQSKVLVKGHTVKMIIDS
GSCNNLASEEMVKKLGLTTHPHPHPYHIQWFHTCGKMKVTRLVKIPFSIGSYHDQIECDV
VHMQACSVILGRPWQYDREVVFDGRTNTYKFMFDGKRVVLHSMTPAAALKDDLARLECEK
KAKSENQIIAKHPASTSKIEPSTTKNEIKLKGALLASKYNICALDEPDSCCYALFCKDPI
LTLATAPSTLYSLPPAITNLLQEYEDVFHDEIPPRMANGRESAHNQEDGIESRTTPIQEG
EDDEDITSSDMLITSHAPMIIPSPSPARPPETALTSNGPSAFMPTPI
Download sequence
Identical sequences Q2RBB2
LOC_Os01g72030.1|13101.m07848|protein LOC_Os11g02590.1|13111.m00189|protein 39947.LOC_Os01g72030.1 39947.LOC_Os11g02590.1 LOC_Os01g72030.1|PACid:21905792 LOC_Os11g02590.1|PACid:21947732

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