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Domain assignment for LOC_Os02g11840.1|13102.m01282|protein from Oryza sativa ssp. japonica 5.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  LOC_Os02g11840.1|13102.m01282|protein
Domain Number 1 Region: 22-197
Classification Level Classification E-value
Superfamily WD40 repeat-like 0.00000000022
Family WD40-repeat 0.011
Further Details:      
 
Weak hits

Sequence:  LOC_Os02g11840.1|13102.m01282|protein
Domain Number - Region: 333-435,491-536
Classification Level Classification E-value
Superfamily TPR-like 0.011
Family Tetratricopeptide repeat (TPR) 0.032
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) LOC_Os02g11840.1|13102.m01282|protein
Sequence length 615
Comment coatomer subunit beta-2, putative, expressed
Sequence
MIKIGREVPVASMDSSGKIIWSKHNEIQTVNIKTIGADNEIADGERLPLAVKELGTCDLY
PQSLRHNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSVDGEYAVRESTSRIKIY
SKNFQERKSIRPPFSAERIFGGVLLAMCTNDFICFHDWAEGRMIRRIDVNVKNLYWADSG
DLVTIASDTSFYILKYNRDVVSSHLDGGGSVGEEGVEDAFELLHEINERIRTGLWVGDCF
IYNNSSSRLNYCVGGEVTTLFHLDRQMYLLGYLANQSRVYLIDKQFNVVGYTLLLTMIEY
KTLVMRGDFDRANALLPSIPKEQHDSVARFLESQGMLEEALEIATDSNYRFDLAVQLGRL
EVAKAIAIEAQSESKWRQLGELAMSTGKLDMAEECLLHAMDLSGLLLLYSSLGDAEGLTK
LTSMAKEQGKNNVAFLCFFMLGKLEECLQLLIESNRIPEAALMSRSYLPSKVPEIVTLWK
KDLQKVNPKAAESLADPDEYPNLFEDWQIALNVEANVAPKRGIYPPAEEYIIHAERPNET
LVEAFKSMHIHLEEVLPDENGDDTHEAIEENGVEESQEDAVEVDVEADGSTDGAVLVNGN
DTEEQWGTNNEESSA
Download sequence
Identical sequences LOC_Os02g11840.1|13102.m01282|protein LOC_Os02g11840.2|13102.m01284|protein 39947.LOC_Os02g11840.1 LOC_Os02g11840.1|PACid:21923198 LOC_Os02g11840.2|PACid:21923199

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