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Domain assignment for LOC_Os05g28120.1|13105.m02893|protein from Oryza sativa ssp. japonica 5.0

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  LOC_Os05g28120.1|13105.m02893|protein
Domain Number - Region: 847-869
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.00067
Family Retrovirus zinc finger-like domains 0.0059
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) LOC_Os05g28120.1|13105.m02893|protein
Sequence length 1854
Comment transposon protein, putative, unclassified
Sequence
MSNKQIFQVYHGPGNVRYGPTGVDLSDFIVSERGIDRPAERSVPSIKGWLMRGLRVDPQT
SDITINVIVSRATEGFYWELMPVQNSRVWRWYLENALQRGWPLALVPFVHPKDPGVQMNM
DDGEGPSAEVNETSVEEVNAREDGGVVAPVGIQPGGVADEGETVGAIVNEMEREDSDNER
VEEGDSSDDETDINQAEWASEDFSGLIVSEEDSVRWEYKENEVIQGAIYSRAEDMKEAVK
HFAVSLHREFRVAKSNRSQYEVRCVKEKDGCPWRVHAYKGKWKDYWTVSVVTKHTCFLPG
VQKYHRNITCAFVASEMYAHVIDNLTYEPRSIIRHIEETYKYTISYAKAWRAKQKIIEMR
FGTYEASYDNLPCLLGVIEERNPGSSYELKKFPSIEHPSKSVLQRAFLALHACKMAFVNC
RPVLCIDGTFLTGKYRGQILIAIGVDGNNQVLPLAFAFVESENTDSWYWFLKLVKTKVVG
MRPNVCLIHDRHAGILRAIEELQFGSMERGYPGVWEDVQSRWCMRHMGANFFKQFKNKEL
MNMFKRLCNQNQEKKFNELWKRLDELTAKCSDQRAAAPSTAVADPPQALGPLPTDSPTLV
RRTRLEIRKFSQWILHEPKEKWAKAYDTGGARYGIMTTNLAEVYNWVMRGVRGLPLVGIV
EFILHRTCRYFRDRFQAVLPSMPNNSILFGAFMQKKLEELRKKAMKHRAVVQGTQQHRFE
ILCQDKAGRGIYRKRVKQECVLKADGTCHCSCAEPKLLHRPCTHVIAAAAECGIPDAVYV
SQYFSKQAIYHTWSGEIYGFGIAGEFTETNDEVLNIPDPSKLRGKAGRRRTRRIHNDMDE
SEAGRVKRCRKCDEHGHTYKHCPKDKEKPSAAEAGLSGSAADVARPKEMARQDTPQLLDP
TIDHRHRSHLTAVLGAQLGTFRARTCGELLTVHDSFVERLREASLLPMCRLVEAAAGDAD
PARRWTVDRSLLAALVDRWRPETHTFHLPCAERIAIGRPEVDQHAYEESLYEERPEVDYP
TMGTMWCRRQRRWAHVQVRRSYPEFVMEFDRLLPTDVVDQAYWMTTVPMVFDICVEPHAP
FHVMRQFGFRQPFPVPFPTTVPAAVHRYSRKGQQSAGDWPAKLATFVEDWLLATEEVVDH
KGEPHTEESYQAYLRWYQPRTRTRVTFAPLEQQPHIASTRDLYARHRDQDFARAVDDINR
VVVDGSTTIQRLGAGIPVPVEEHLTTYTRMVESMHSILRVLTCRADDVARADAAVQRPPV
PTGPRPAAHIPRPTPPPHGGFRAPFSTPPSSARPSVVPPTGFAQFAMTQAAHFSQAAGSA
SQAAGTSSQGPPLDHAGTSSDRLLPSTLLFDITDFDFASGSTEDVIGPSQLGGAPPVQTQ
DQAQATPPRDTRATRAVPPDRFTYSQDHVRAQARRTKRGRGAGQGQRRGVEDPNWRSDPC
VYLLPPWCQRPLCLCGDRCQLMASRNPDIQGRRFFRCPNYDRETRTTACAYIEWVDTENP
VLDLTTCLQEGRWYFASESTEQYLQRKAAYERQCREQQSDWRVLTTALPPWEARPRCRCG
DRCQVLRSINPTTLGRRFFVCPNILDDDFMEPPRRCQYREWIDTRRVLTPPSRVVQLELP
EQYRVTKARGSVLGAVQTQRGVAKRFAQTDTVAHSKTGTGSALEQILVVSCWFYHQWCHY
SSIEMKLEMNKVMHQWTHGDEQGEGGIANSSGSIVLEHGAHVRICPIICDANAKRFIWFP
HLFFSGAKMHQCNNSWMEMHCTSNFRSKDVFDGRLCLIKSVLSALPVHFMSVLQMPKWAI
KDMERKCRGFLWKGQEEIHGGHCLVSWRNVCTPVEKGGLGIKDLDLFGQALRLK
Download sequence
Identical sequences LOC_Os05g28120.1|PACid:21940884 39947.LOC_Os05g28120.1 LOC_Os05g28120.1|13105.m02893|protein

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