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Domain assignment for LOC_Os07g32580.1|13107.m03301|protein from Oryza sativa ssp. japonica 5.0

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  LOC_Os07g32580.1|13107.m03301|protein
Domain Number - Region: 623-651
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.00111
Family Retrovirus zinc finger-like domains 0.007
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) LOC_Os07g32580.1|13107.m03301|protein
Sequence length 1340
Comment transposon protein, putative, unclassified
Sequence
MSNKVTFQIVHGEGNIRFGPDGVDLSDFVMTSKGIDRPAERTFQSIYSWLLRGFRIDQEV
YTMSVSVVVSRATEGYFWELMPMDSTAAWRRYVEMAFERSWPLVIFVSVQEKDINVSMQT
EDVEGPINAGDVVGPSMQNEENQPREEQAMGMADEGERVGIIVDEIEREDSDNEEADDDA
SSDEEGDVMATDWANEDFSGLVISEGDHVPWEYKENEVIDGARYAHKDEMKEAVKHWAVS
LQREFRVVKSTNYVYEVRCMKEDCPWRVHAYKGKWNDYWKVSIVTEHKCYLQGVEKYHRN
ITSAFVASEMYSSVVGTIGFEPKSIIRHIENKFKYTISYAKAWRAKQKIIEMRYGTFEAS
YDNLPRLLATIAQRNNNTYYDLHTFTSVDDRTKSVLQRAFFSLGACINAFVHCRPVLCID
GTFMTDKYRGQILTAIGCDGNNQVLPMTFAFVESENTESWYWFLERVHIAVDEKGLPAKW
PDVRSRWCMRHMGANFYKQFKNKHLMELFKRLCAQNQEKKFNELLDKLDELTTKQTDEQS
RIPQVEGDEPPIPLGALHDDPPTMRRRKEAIFHTWSEEIYGFGISGSYTTLSAQVFYIPD
PSKLRVKKGRRQTRRIRNDMDESEAGGRTLRCSKCDLRGHTYKKCPKNAEVPSGVDASPS
GQASDGMAYDTPALLNRGIDRNHRSFLSAVEGAQLGTFRPRMSREWLRVDPRHVPWLRAA
GLLPLCRLVEAAADDRDPAKRWDADRSLLAALVDRWRPETHTFHLPCGEMALTLQDVSYL
LGLPLAGAPVGPVDGVFGWKEDITARFEQVMRLPHLGLANTLPPYSTVGPSKAWLLQFTT
DLLHPDADDNSVRRSLEAYLLWLFGWVMFTSTHGHAVDFRLVHYARSIADAQPQDVPQWS
WGSAVLAATYRALCEACMKTDAGAIIAGCPMLLQLWAAERFAIGRPVVDSAPYGVGRSAQ
WQEDGPTMGTYWCRRGRRYAHVQVRRGYPDFVFEFDRLQPSDVIWEPLTRRGQLAGTLWA
PRVQQYVDDWVLATEEVINELFPHTEENYRDYLRWYLPRTRARVTFTPDAPEPHVAAVTD
AYPTHRDRDYFMGADAARDISADITAVQVRLNRGLHLTDVEQRVTFDQMQEKMRAVMRVF
SCRSAVDVVPPAGPVQPRPRAPTVGAGPQPTVPVSHAGFAAGIFGTGASSSHAGRTSPTS
QFYDDDLHGAHHHDVLGSSQLGGAPEAHTQEQPEVTPVQAGRVGRAVPPDRLTYSQGHIR
AQGRRDRVLFIHMVLEQLMLTTTHFRRFTTYRPMCNFIEWVDMENPQNDGTCAYPRSETR
SDYLRRKDEHERRIAAEALE
Download sequence
Identical sequences LOC_Os07g32580.1|13107.m03301|protein LOC_Os07g32580.1|PACid:21900425 39947.LOC_Os07g32580.1

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