SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for LOC_Os09g16750.1|13109.m01600|protein from Oryza sativa ssp. japonica 5.0

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  LOC_Os09g16750.1|13109.m01600|protein
Domain Number - Region: 39-116
Classification Level Classification E-value
Superfamily BAR/IMD domain-like 0.0123
Family BAR domain 0.034
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) LOC_Os09g16750.1|13109.m01600|protein
Sequence length 181
Comment retrotransposon protein, putative, unclassified
Sequence
MVGGSRECGGAHLEKQFHSYFYSGTHEMKLSDLTSIQRHDETVQDYIQGLITPIKEFSSQ
DFESLSHLAQKVTLHEQRFAEAKKNFKKVNQAYPYMYDSEEEDDFEVAAAEWVRSKKVVP
CQWVKNSGKEERYDFDITKVDKIFDLLLLEKQIQLPASHIIPSAEELGKKKYYKGTRNGY
L
Download sequence
Identical sequences LOC_Os09g16750.1|PACid:21928293 39947.LOC_Os09g16750.1 LOC_Os09g16750.1|13109.m01600|protein

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]