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Domain assignment for LOC_Os10g18060.1|13110.m01483|protein from Oryza sativa ssp. japonica 5.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  LOC_Os10g18060.1|13110.m01483|protein
Domain Number 1 Region: 844-1259
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 2.08e-27
Family Reverse transcriptase 0.048
Further Details:      
 
Domain Number 2 Region: 730-823
Classification Level Classification E-value
Superfamily DNase I-like 0.000000000000677
Family Sphingomyelin phosphodiesterase-like 0.055
Further Details:      
 
Domain Number 3 Region: 239-280
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.000000000349
Family Retrovirus zinc finger-like domains 0.0022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) LOC_Os10g18060.1|13110.m01483|protein
Sequence length 1265
Comment retrotransposon protein, putative, unclassified
Sequence
MASDKKNTRNTILDSRVQTGDTQAAQCCSTGLSQLGSVGFHGDGDMSARREERCGDGDSL
HGAGWSIRDLIPKQVEEIELPSRWLWVPRGRVLEPQLGFPARKAEIHKFGGSARRIWKAA
RRRVDSRSFAEVVRGDSMERRPPNPRPDQWQSNKRRAVDEEQRDWGDRAPWEREEEELRG
RLLGQNQRRPEGRWRPDERREGGRNWQGEKGRVWQGEQREGLDVRRFDKGRKEQVQEGPR
EDTIKCYNCGEFGHHLVRCTKPSLCYVCKSSGHISSHCPTMMGSCKRVEIKFKGYGVNEQ
GFYSMKIDVPAGEGSKTACRGILSVIRGKGSVPKVMAELSSLFKGLKWDWKVRQINDNDF
LVDFPNPEARSKLTLVKSFDFDKFPIKASVTESKMTVDELYVVWVRMYGMPDFARSEASI
KAVAELVGELEEVDGTSVAKGEFVKMKIELIYINGVGYKLRWEVEKDSLKGTDLLPPDGN
DDEEEDDRDEDKKDQEKKEEGDKGDLMDIDLQKKYAIRGYEDEEDGKCAIPTDSDIEKMR
EEENEGEDEEHEQGACEDVMGQIIEEEAFLKVERKNKKKGVIPAKRQGLRVRDKNVPVQL
KAEIRKSKVNLNPGTSNPYAIFNSVDRNILKEIASASCITLGDSEEEINVNLEAICAREV
AQAALFEAEQNLISMAAVDDSTGREEIEGAVTDETTHQEGVASDGLTVVDEEPIGEGLVK
LKPGKAHQEGRDIFLSELGDAISKCVYPLLMGGDFNMYRYSSDKSNGVVDVRRMDMFNKF
VNDHSLNEFYRAGCKFTWTNKQLSPVIGVLDRVFASNSWEQKNPLTLDGESTISDFTQIQ
THIYDYYKKLFGREGCRNVHLSDDVWGTNLRLSEEDKLDLVKPFTFQEIDEVIKGMKSNT
APGPDGFPVGFYKNMWPEFRVLVKEMLDELHQGSLDTDRLKYGVVTLLPKVLDANTIKQY
RPICVQNVIIKILTKTINERVARGCVILHETLHELKRKGEKGVIFKIDFEKAYDRVNWGF
LYEVMKKNNFSPELISWVKKFNEGAKVSINIYGDQGPFFRTFRGLRQGDPLSPLLFNLVG
DALAVILEKAKERGILKGLVPDLVPRGLSHLQYADDTILFIKVGDDNVRVLKFLLFCFEE
MSGMKINYQKSEVYVLGVDKEEEIRIANMLNCKVGTMPFTYLGLPMHCEKVGMKDFRLII
QKVEKRLQTWKSGYLTYGGRKIKINSCMSSAPMYAMGFYYLPREFHKKMDSLRGNFYWQG
LGEKK
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Identical sequences Q8S768
39947.LOC_Os10g18060.1 LOC_Os10g18060.1|PACid:21883581 LOC_Os10g18060.1|13110.m01483|protein

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