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Domain assignment for LOC_Os12g02010.1|13112.m00126|protein from Oryza sativa ssp. japonica 5.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  LOC_Os12g02010.1|13112.m00126|protein
Domain Number 1 Region: 358-390
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.000000119
Family Retrovirus zinc finger-like domains 0.0061
Further Details:      
 
Domain Number 2 Region: 456-554
Classification Level Classification E-value
Superfamily Acid proteases 0.000000422
Family Retroviral protease (retropepsin) 0.045
Further Details:      
 
Weak hits

Sequence:  LOC_Os12g02010.1|13112.m00126|protein
Domain Number - Region: 24-73
Classification Level Classification E-value
Superfamily BAR/IMD domain-like 0.0523
Family FCH domain 0.051
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) LOC_Os12g02010.1|13112.m00126|protein
Sequence length 767
Comment retrotransposon protein, putative, unclassified
Sequence
MSGTSSDEPTLKNLAHKLKGMENWYEELMRNSKSYKESTDKHLKTLSESLVKVVDQIEQM
NRSHKQLTENIQNINIGHENIVRRIGLLEAAGEEGVGATAHRHQRYDDEDEEQSVADDEE
EDESVGNRRRRRIRDKDDPLSKVKFTMPSFDGKFEPSVYLDWELAVEQKFSCYDFPDNKK
VKAASSEFTSFASLWWNDICGRGLRPRTWDDMKRTMRSRFVPSYYARDMLNKLQLLRQGS
NSVETYYQEMMIALSRCNLQETEDARISRFYGGLNREIRDILEYKEYNTMNRLFHFACKA
EREVQGRNKHRSSLAGATSTRQSTPRQSTTVVRPPTSMPSHAQETSKNASVQTPAKSATS
VDSTGRTRDITCHRCHGIGHIARDCPNRRALFVNADGEYTSASDCDDEYALAATDHAGGQ
DDEDIEEVHLHPESLDQYPSLIVKLALSAKEKCEEQNQRHNLFQSKVLVKGHTVKMIIDS
GSCNNLASEEMVKKLGLTTHPHPHPYHIQWFNTCGKMKVTRLVKIPFSIGSYHDQIECDV
VHMQACSVILGRPWQYDREVVFDGRTNTYKFMFDGKRVVLHSMTPAAALKDDLARLECEK
KAKSENQIIAKHPASNSKIEPSTTKNEIKLKGALLASKYNICALDEPDSCCYALFCKDPI
LTLATAPSTLYSLPPAITNLLQEYEDVFHDEIPPRMANGRESAHNQEDGIESRTTPIQEG
EDDEDITSSDTLITSHAPMIIPSPSPIRPPETALTSNGPSAFMPTPI
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Identical sequences Q2QYP3
LOC_Os12g02010.1|PACid:21934111 LOC_Os12g02010.1|13112.m00126|protein 39947.LOC_Os12g02010.1

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