SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for LOC_Os12g31880.1|13112.m03252|protein from Oryza sativa ssp. japonica 5.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  LOC_Os12g31880.1|13112.m03252|protein
Domain Number 1 Region: 1-211
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 9.03e-29
Family G proteins 0.00034
Further Details:      
 
Domain Number 2 Region: 269-378
Classification Level Classification E-value
Superfamily Initiation factor IF2/eIF5b, domain 3 1.57e-26
Family Initiation factor IF2/eIF5b, domain 3 0.00032
Further Details:      
 
Domain Number 3 Region: 385-519
Classification Level Classification E-value
Superfamily Translation proteins 3.74e-23
Family Elongation factors 0.00045
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) LOC_Os12g31880.1|13112.m03252|protein
Sequence length 520
Comment translation initiation factor, putative, expressed
Sequence
MRSRGMSLCDIAVVVVDIMHGLEKQTVETLALLKDRNVRFIVVLNKVDRLCGWKHCPDAP
IKKALENQSGDVKREFGWRLTKVVTQLKENGFNTALYYDNQKFRKVFDIVPTSAISGEGI
PDLLLMLVLRSQATMMEKLTFVNTVECTVLEVNDDKDLGTTIDVVLINGVLHKGDQVNVC
TKQGPVTTTIRDLLTPHPLKELRVKGIYKHHKELKAAQGVKIVARGLKYAIPGTSLVVVK
PGDDLGQSEAKSQRNENEEGNVIQEISRLKTCKEGVYVQASTFGILEAIIEHLNSPGVNV
PVSGCNLGPIEKKDVMKASAMLKRKEEYAAILAFNVRVMPEADVLASESGVKIVTADTVY
KLVDSFNEHIKRSKELKKMQCAANAVFPCTLKILPNRVYRKKDPFLCDVEVLEGVVKVGT
PICVYVGGTVHGLGRISSMQTSNGNQIDSAKRGVVVSVKITGESPKEKTWLYGRHFDESN
ELISQISRRSIDVLKEYYRDEMNDENWQLIRRLKKLLDIA
Download sequence
Identical sequences Q2QQ85
LOC_Os12g31880.1|13112.m03252|protein 39947.LOC_Os12g31880.1 LOC_Os12g31880.1|PACid:21934965 XP_015619368.1.37577

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]