SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for LOC_Os12g41400.1|13112.m04321|protein from Oryza sativa ssp. japonica 5.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  LOC_Os12g41400.1|13112.m04321|protein
Domain Number 1 Region: 23-81,120-246
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.34e-39
Family G proteins 0.00000315
Further Details:      
 
Domain Number 2 Region: 240-354
Classification Level Classification E-value
Superfamily Translation proteins 4.2e-37
Family Elongation factors 0.0000449
Further Details:      
 
Domain Number 3 Region: 355-452
Classification Level Classification E-value
Superfamily EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 1.29e-31
Family EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 0.0003
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) LOC_Os12g41400.1|13112.m04321|protein
Sequence length 464
Comment eukaryotic translation initiation factor 2 subunit gamma, putative, expressed
Sequence
MSRRGLMEQDLSKLDVTKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF
KNELERNITIKLGYANAKIYKCEDEKCPRPMCYKAYGSGKEDSPHCDVPGFENTRMKLLR
HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIIL
QNKIDLIQESAAMNQHEAIQKFIQGTIAEGAPVVPISAQLKYNIDVICEYIVKKIPIPER
NFTSPPNMIVIRSFDVNKPGSEVDEIRGGVAGGSILRGVLRVNQNIEVRPGIVMKDESGN
IKCTPIYSRIVSLYAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPDVY
VELEINFFLLRRLLGVRTKGTEKAGKVSKLTKGEILMLNIGSMSTGARVVAVKNDLAKLQ
LTAPVCTSKGEKVALSRRVEKHWRLIGWGQIQAGTTLEVPPCPL
Download sequence
Identical sequences A0A0D3HWK4 A0A0E0BV06 A0A0E0FDZ9 A0A0E0JC76 A0A0E0MPF3 J3NEU2 Q2QME5
LOC_Os12g41400.1|PACid:21936323 OPUNC12G16590.1 OPUNC12G16590.2 OBART12G18340.1 OGLUM12G19980.1 OGLUM12G19980.2 OGLUM12G19980.3 OB12G25000.1 LOC_Os12g41400.1|13112.m04321|protein ONIVA12G17180.1 OMERI12G12980.1 XP_006664178.1.55871 XP_015620010.1.37577 39947.LOC_Os12g41400.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]