SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for LOC_Os01g42960.1|13101.m04424|protein from Oryza sativa ssp. japonica 5.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  LOC_Os01g42960.1|13101.m04424|protein
Domain Number 1 Region: 219-444
Classification Level Classification E-value
Superfamily TPR-like 1.02e-26
Family Tetratricopeptide repeat (TPR) 0.011
Further Details:      
 
Domain Number 2 Region: 493-676
Classification Level Classification E-value
Superfamily Thioredoxin-like 2.01e-24
Family Thioltransferase 0.009
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) LOC_Os01g42960.1|13101.m04424|protein
Sequence length 692
Comment TTL1, putative, expressed
Sequence
MSEADRIRVRAAALALDGGGGGAVRDKPDAKADVFADLGSPVSPLRARASVATSSSSSSG
SAKSPAPSNAGALALAGGRSHSGELTAESTPPRLPGHRRCGSGPLIFSGGSSGGSGGGGG
DRGSTASSPMTNALPAGNICPSGRVPVAAAAPPPPRSRPDVLGSGTGNYGHGSIMRGGGG
MAPARSSIDSSSFLGHAPRSPATFPAASSASSGSLQDVTRLGNEWYKKGKHAEALRHYDR
AVALCPESAACRGNRAAALAGLGRLADALRDCEEAVRLDPANGRAHSRLAGLCLRLGMIS
KARRHLTQAGHLHQSDPSEWEKLQEVEMHQGRSIDARKVGDWKSALREADAAIAAGADSS
RLLLAIRSEALLRLHKLEEADSTLASLLKLDSVLLYRMGANPSGMLAESYVSIVRAQVDM
ALGRFDAAVEAADNARFIDPGNAEVGMILNNVKLVAKARAQGNELYKAAKFSDASIAYSE
GLKYEPSNPVLYCNRAACWGKLERWEKAVDDCNEALRIQPNYTKALLRRASSYAKLERWA
DCVRDYEVLHKELPADTEVAEALFHAQVALKTTRGEDVSNMKFGGEVEMVTSVEQLRAAI
GSPGVSVVYFMSIMNQQCTLITPSVNSLCSECPSLNFLKVNVEDSPMVAKAENVRIVPTF
KIYKDGVKVKEMICPSLHVLRYSVRHYAVSSS
Download sequence
Identical sequences Q5ZDK5
LOC_Os01g42960.1|PACid:21904512 39947.LOC_Os01g42960.1 LOC_Os01g42960.1|13101.m04424|protein XP_015624839.1.37577

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]