SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for jgi|Monbr1|28129|fgenesh2_pg.scaffold_24000018 from Monosiga brevicollis

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  jgi|Monbr1|28129|fgenesh2_pg.scaffold_24000018
Domain Number 1 Region: 1095-1141,1177-1337
Classification Level Classification E-value
Superfamily WD40 repeat-like 1.57e-19
Family WD40-repeat 0.015
Further Details:      
 
Domain Number 2 Region: 1823-2023
Classification Level Classification E-value
Superfamily WD40 repeat-like 1.49e-17
Family WD40-repeat 0.021
Further Details:      
 
Domain Number 3 Region: 187-422
Classification Level Classification E-value
Superfamily Arabinanase/levansucrase/invertase 0.0000000000000173
Family Glycosyl hydrolases family 32 N-terminal domain 0.012
Further Details:      
 
Domain Number 4 Region: 1384-1456
Classification Level Classification E-value
Superfamily L domain-like 0.00000000145
Family Ngr ectodomain-like 0.064
Further Details:      
 
Weak hits

Sequence:  jgi|Monbr1|28129|fgenesh2_pg.scaffold_24000018
Domain Number - Region: 696-732
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 0.000103
Family Glycosyl hydrolases family 32 C-terminal domain 0.018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) jgi|Monbr1|28129|fgenesh2_pg.scaffold_24000018
Sequence length 2128
Sequence
MSVKKCQINLSLSNLFSRVSLEFSLESLSRISLSISLSLESLSSLSLSSLSLSNLSRVSL
FRVSLESLSLSLSLSLSRLSRISLSRVSLFRISLESLSNLSRISLLSLESQISLESLSLC
LCLSLCLSVAFICQIHLSDRQTIWITTTSLSLSARAHLKGWINDAMPVTIQDQSYDALTS
ISLTSQTYMYHICNPTSTLPPWAPDGHQAYCLATSPDGIRWTAHGVAMNNTGGTGFVVPF
ATLNNSHFTGTGFYLHQSGSRAATSQTTMGFQTLGSSALLPPPPSAGLNISGDVALLNAA
NNSINIIVAASTGIPMQYGAPAAMIYTSTNGSVFSYLSTLWTGTEKEGPRAECPSIIIVD
GMAVSIWSSPSRGATLWEVGTLDSSNNTFQSQFTGSADFGLAYAGRPYLDYLNRPLLMLW
IRDGLNAILLHTTVFSNNPCCGWICQLSELTTSAPTANGSMALLKSMEDPTQETRIFVTA
IEEQRCSDTPIVAGTRVDHPGNDIKGVPLSGTTNTSVYCRELCCNTSGCQGFVYVTAQPG
SGTPTCWLKSKLSNPQPLAVAYSGVVAAPTVVVGLDTSKSSNRTDVPKMIVSTRLSANAL
QEAANSSCAPVLVPRDMPGNDYKHFVPDTNTSGSCVEACCSDARCMALTFVPSQPVDMPP
CTAGQPCCWLKSAATPDQASSIPGVASTNVTRWTVMVDIEVVVDNTVVEVYVDGGAAVLT
LPVFPTVADVSVIDFVAQIRIRSSSAMALATEFVDEAVKEYLLFRGLTRTSQVMSQELAS
DNNQTFRVDAILKQILNHVEKSQLLDLIDLWQRLETRFFARLDHKFQVAAGSLRSSLLKL
YAVHARKTERTDKLAELLQVIAAEHQHRPEWKDWMALPYISDAARQAPFRTYFTFAWRDT
FLVSLHNFLTAVFRHLPLPFLLRYEMEQRRIQSLEDEIELLKFQLWALSRNDPTHQRQIT
AMANVTAAQHQQAPPDALTSTAPALTSTASTPAAAERDAPHTPATSERTRPAPLPSALAG
SPSSPSSQQGRSPAVGQERRSMTDVIISDTTTVATPTPSTPTTQMEDVSSLGSHRARSVS
KLKREPFLIFSSEAFCEHSAPVRLVKRAPSGPLVISYDESHCIKLWNASSLEVVMAFDAP
EDLVAALWCQTLDRVQPFVLVYASGALALVSPMPGATPTTANVHEHTNSPQVAAVGSQTG
QVYLLDLDQGKVIMKLQPHHMAIRQLFFSADWNRIYALSQDGCLKWTDGRRLGEPPGVVL
DSRASPEESEASVPIMATSDGAQFCILDAEGRGDPTRALIFNLAEGGEPVMRLETHSNRL
AAVDWTGDCILLGDADGAAAEAASPVGEAAGSEHDEPVARPARRKAIDLSAFHPGQPASE
VTQLKVTSLKAKQLEALDLAAYTKLTDLDLSGCQLKSLELAALPKLTHLDVSDNDLQWLK
GLVSLPALKSIHYTGNPRIPAAGFADDQQQRESNDSRLHLMAERVARDVDRQVEQAYQKL
GLQESSEHQDPEAVRAALRKHFAAKLNPTDNMKAGYERHMLSRLIDRMPGAAKTAATEDG
SPAAKRSATGAGSAGQKSTSRGAGRPRKPLPVDENGNPIPKRGVGRPRKPPPVDEHGNPI
PKRKVGRPRKPPPVDENGNPIPKRKVGRPRKPPPVDEHGNPIPKRRVGRPRKQPELDEQG
NPIPPRRAARRSTSKAESAPTTDGEAASGTTTENTLAEPNGAKAPTKRRSRAAKTAVDGD
AAPSLAPPPPTEPQILDMAGPVSRIPMPDAAAEPVPVVPLDPVTGLQLQRAFRMHHEDDA
SVLAAKHAWGVACAPPEDPRYRTVAASVGGSFVCLVDMIAQRVVQRYHFPNEDFYCCAWS
YIPELQSSILIAGGLQGVLHIISPDKNECYEMLGTTAEPIHTVVVHPRSPRHCISAAEDG
DVTLWGLPMPDEPYDLQAWTHDLDKECHSVAVSPDGELLVAALHSGDMQCYKLDIAKPAS
FLKLACTIPPPPVEAVDTVAFLSKRILVTRVPGSARMSLFKISDDASATEPCGDIDVVPL
PQYFVRFSVIPTNQAGVVQVMVPGPRGMVQIGTVSGLDTSSPSATTQHVLVHEQLGATIL
PRQMAVSSAAKRLVAACEANYVAVSELN
Download sequence
Identical sequences 81824.JGI28129 jgi|Monbr1|28129|fgenesh2_pg.scaffold_24000018

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]