SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for jgi|Monbr1|28438|fgenesh2_pg.scaffold_26000049 from Monosiga brevicollis

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  jgi|Monbr1|28438|fgenesh2_pg.scaffold_26000049
Domain Number 1 Region: 1089-1196
Classification Level Classification E-value
Superfamily cAMP-binding domain-like 6.02e-20
Family cAMP-binding domain 0.01
Further Details:      
 
Domain Number 2 Region: 932-996
Classification Level Classification E-value
Superfamily SpoIIaa-like 0.0000053
Family Anti-sigma factor antagonist SpoIIaa 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) jgi|Monbr1|28438|fgenesh2_pg.scaffold_26000049
Sequence length 1207
Sequence
MFTSSNSQTRSLSLSNLSLSLTHTHIHILKSLSLSRNLSLSKSPPLDSLYDVPLSHFFSL
FLSLSLSVSLSVFLSASCLFSISLSSLSLSLSNLNLSLSLNLSLSLTQRDRWRLVTSKMD
SRRPSQPIPVTAVRRPSSPSSSATRESYDQLGEQFEFEDTSQSQEYQQPTSPATSGIATT
SLRHRRLAPPHSLKTNLSPSKASLPVMSPYTRGTFGRLRRPAHAAEQAHTPDHHALQNSR
TMDDNDEDLESNVHDPLLAKHHFDDPAEQDSEDPAAPSAHRHGGSDSPSGGKGYGATSDQ
EPVDIELHSSLASPSQSFWQRQGTALLFGIINAIIIVPVVVSYTQIIFSNTFYKPYLPTL
IKLVFFSSVVHQTCFTVLSSLSFAIGQVQDAGLIFLSAMATSIATQLQNEGHEAHAILAT
TLVWIGLSTALLGLALYITGSLKLASIVQYLPMPVVGGYLSYIGLYSLQAGLALMSDCTL
NSVMDWGQLLKPDIGILLAPGLACGLLLMVVSRTVNHFAALPLCLVAIPVGFYIVLACTS
TSLTEARSAFNGSGWVAPTSPPTQFYDTWNDFKFADVKWHVIPSLLPTWLAMYIVVAFSS
CLDVAAIQMELGSPLDFNHELKTVGLSNFFSGITGGQTGSYIFSQTLLTCRAGVNSKLNG
VVIILTCLLMFGLPMSLLAYMPKFFFGSVLVFIGFDLMVDWLISSFKMVALLEYIIVWGT
LIAIVALNNLEYGFLCGIGLCLVVFIFQYSREPTAEKLRCRSNVIRGFRQRQQLSRHGKA
IVAMRLTGHVFFGKAVGLLKEVERRVVVRTFLSEPYARKPSVADFFVRAGRLIQRRMSQA
PPPALNKVQEDDEEDFPPESPLPDLGHLDDSASRSSQPRSPLRKQQSSSGLARPDPMATR
LAEQESPLLTLGDNEDLAYLHEADDYYRPHTWAKREGLVATRYLILDFSSVTAIDATAIR
SCFMILRQRLQRNNVTLVFTGMSELIERLMVQQEVLPEPDILHVDNEDRQEGRQMTAPLE
HLVDDVEAVDGCLALPSLDHGLEWAEDRLLQTLQVKHPRRLSVSEPSIRGILEAYGVLEP
SLASLTDDDLQQYYTERHCASGDLVFRRGDPADRLYFIIQGDVVLYKHSVAQRARRYDQG
GVFGEMNFLLQQRRWYNACAVSRTVLAELTIDSYRMMKRQHPGLFIALQAALLKSMARIA
SDNAFSS
Download sequence
Identical sequences A9V862
81824.JGI28438 XP_001748951.1.20067 jgi|Monbr1|28438|fgenesh2_pg.scaffold_26000049

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]