SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSOPRP00000001698 from Ochotona princeps 69

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSOPRP00000001698
Domain Number 1 Region: 49-133
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 2.09e-22
Family Spermadhesin, CUB domain 0.0006
Further Details:      
 
Domain Number 2 Region: 169-293
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 1.23e-18
Family Spermadhesin, CUB domain 0.0046
Further Details:      
 
Domain Number 3 Region: 291-327
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000301
Family LDL receptor-like module 0.003
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOPRP00000001698   Gene: ENSOPRG00000001847   Transcript: ENSOPRT00000001843
Sequence length 533
Comment pep:novel genescaffold:pika:GeneScaffold_3737:6642:123191:-1 gene:ENSOPRG00000001847 transcript:ENSOPRT00000001843 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MIHGRSLFPIVASLIILHLSGATKKGTEKQTTSETQKSVQCGTWTKHADGGIFTSPNYPS
KYPPDRECIYIIEASPRQCIELYFDEKYSIEPSWECKFDHIEVRDGACVFSYETGRFCGQ
QNPPVRKSSGRFLXXXXXXXXXXXXXXXXXXXXXXXXPDFKDLGVLKPLPACEFEMGGSE
GIVESMQILKEGKASASEAVDCKWYIRAPPRSKIYLRFLDYEMQNSNECKRNFVAVYDGS
SSVEDLKAKFCSTVANDVMLRTGLGVVRMWADEGSRNSRFQMLFTSFQEPPCEGNTFFCH
SNMCINNTLVCNGLQNCVYPWDENHCKEKRKPSLLDQLTNTSGTVIGVTSCIVIILIIVS
VIVQIKQPRKKYVQRKPDLDQTVFQEVFEPPHYELCTLRGTGATADFADVAEDFDSFHKL
RRSSSKCIHDHHCGSQLSSTKGSRSNLSTRDASVLTEMPPQPIKPLIPPVSRRNILVMKH
NYSQDAADACDIDEIEEVPTTSHRLSRHDKAVQRFCLIGSLSKHESEYNTTRV
Download sequence
Identical sequences ENSOPRP00000001698 ENSOPRP00000001698

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]