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Domain assignment for ENSOPRP00000007767 from Ochotona princeps 69

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSOPRP00000007767
Domain Number 1 Region: 224-311
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 1.88e-20
Family Canonical RBD 0.0041
Further Details:      
 
Domain Number 2 Region: 162-184
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.00000353
Family CCCH zinc finger 0.0032
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOPRP00000007767   Gene: ENSOPRG00000008481   Transcript: ENSOPRT00000008485
Sequence length 420
Comment pep:novel genescaffold:pika:GeneScaffold_5436:707803:716103:-1 gene:ENSOPRG00000008481 transcript:ENSOPRT00000008485 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSFKDDMPKSDVNKEYYTQN
MEREISNSDGTRPVGMLGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLG
DTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNV
KWGRSQAARGKEKEKDGTTESGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAV
VNIALPPPPGIAPPPPPGFGPHMFHPMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKHSSP
Download sequence
Identical sequences ENSOPRP00000007767 XP_004587587.1.84141 ENSOPRP00000007767

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