SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

  Home > Genomes > Ochotona princeps 69 > ENSOPRP00000008486

Domain assignment for ENSOPRP00000008486 from Ochotona princeps 69

Domain architecture

Domain assignment details

(show help)
Strong hits

Sequence:  ENSOPRP00000008486
Domain Number 1 Region: 723-827
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 1.7e-32
Family Spermadhesin, CUB domain 0.00043
Further Details:      
 
Domain Number 2 Region: 65-171
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 1.26e-29
Family Spermadhesin, CUB domain 0.00041
Further Details:      
 
Domain Number 3 Region: 546-655
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 4.84e-27
Family Spermadhesin, CUB domain 0.001
Further Details:      
 
Domain Number 4 Region: 1759-1863
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 1.7e-23
Family Spermadhesin, CUB domain 0.0032
Further Details:      
 
Domain Number 5 Region: 2275-2337
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 1.7e-19
Family Spermadhesin, CUB domain 0.0015
Further Details:      
 
Domain Number 6 Region: 2807-2875
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 8.09e-19
Family Complement control module/SCR domain 0.00087
Further Details:      
 
Domain Number 7 Region: 1930-2039
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 1.05e-18
Family Spermadhesin, CUB domain 0.0026
Further Details:      
 
Domain Number 8 Region: 2748-2817
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 3.75e-17
Family Complement control module/SCR domain 0.0019
Further Details:      
 
Domain Number 9 Region: 3161-3225
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 5.11e-17
Family Complement control module/SCR domain 0.00088
Further Details:      
 
Domain Number 10 Region: 2864-2926
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 6.61e-17
Family Complement control module/SCR domain 0.0013
Further Details:      
 
Domain Number 11 Region: 2215-2284
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000000189
Family Complement control module/SCR domain 0.00094
Further Details:      
 
Domain Number 12 Region: 2975-3036
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000000403
Family Complement control module/SCR domain 0.001
Further Details:      
 
Domain Number 13 Region: 3212-3274
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000000256
Family Complement control module/SCR domain 0.00091
Further Details:      
 
Domain Number 14 Region: 1869-1935
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000000987
Family Complement control module/SCR domain 0.0019
Further Details:      
 
Domain Number 15 Region: 2043-2105
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000000000107
Family Complement control module/SCR domain 0.0014
Further Details:      
 
Domain Number 16 Region: 3338-3395
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000000000153
Family Complement control module/SCR domain 0.0013
Further Details:      
 
Domain Number 17 Region: 1520-1579
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000000000324
Family Complement control module/SCR domain 0.0016
Further Details:      
 
Domain Number 18 Region: 2939-2988
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000000000417
Family Complement control module/SCR domain 0.0014
Further Details:      
 
Domain Number 19 Region: 2692-2759
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000486
Family Complement control module/SCR domain 0.002
Further Details:      
 
Domain Number 20 Region: 177-237
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000486
Family Complement control module/SCR domain 0.00092
Further Details:      
 
Domain Number 21 Region: 1175-1232
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000125
Family Complement control module/SCR domain 0.0015
Further Details:      
 
Domain Number 22 Region: 832-891
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000216
Family Complement control module/SCR domain 0.0015
Further Details:      
 
Domain Number 23 Region: 3290-3333
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000431
Family Complement control module/SCR domain 0.0022
Further Details:      
 
Domain Number 24 Region: 2102-2139
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 0.0000000000903
Family Spermadhesin, CUB domain 0.003
Further Details:      
 
Domain Number 25 Region: 1060-1096
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 0.00000000034
Family Spermadhesin, CUB domain 0.0031
Further Details:      
 
Domain Number 26 Region: 3416-3454
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000917
Family Complement control module/SCR domain 0.0027
Further Details:      
 
Domain Number 27 Region: 305-343
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 0.0000089
Family Spermadhesin, CUB domain 0.0081
Further Details:      
 
Weak hits

Sequence:  ENSOPRP00000008486
Domain Number - Region: 2408-2445
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00027
Family Complement control module/SCR domain 0.004
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOPRP00000008486   Gene: ENSOPRG00000009143   Transcript: ENSOPRT00000009273
Sequence length 3693
Comment pep:novel genescaffold:pika:GeneScaffold_3620:25351:709433:-1 gene:ENSOPRG00000009143 transcript:ENSOPRT00000009273 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
MNAIRKGESRAGEPRPREPRARTCARCGRLHSVLRKKMGIKSGCTLWNLVFLLTVSCVKG
FIYTCGGTLKGLNGTIESPGFPYGYPNGANCTWVIIAEERNRIQLVFQSFALEEEYDYLS
LYDGHPHPTNFRTRLTGFHLPPPVTSTKSVFSLRLTSDFAVSAHGFKVYYEELQSSSCGN
PGVPPKAVLYGTRFDVGDKIRYSCVTGYILDGHPQLTCIANSVNTASWDFPVPICRXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXLSGMNIPPPIISNKNWLRLHFVTDSNHRYRGFSAPYQGSSTLTHTTSTGELEEH
NRTATGAIAVASTPADVTVSSVTAVTIHRLSEEQRVQVTNLRNSGLDPNTSKDGLSPHQA
DTQSTRRRPRNAEQIERTKEHAVTHRKKAIDFKSRGFKLFPGKDNSNKFSIXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXKTCGSNLQGPSGTFTSPNFPFQYDSNAQCVWVITAVNTNKVIQINFEEFDLEIGYDT
LTIGDGGEVGDPRTVLQVLTGSFVPDLIVSMSSQMWLHLQTDESVGSVGFKVNYKXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPCL
SNFTAPMGTVLSPDYPEGYGNNLNCIWTIISDPGSRIHLSFNDFDLESQFDFLAVKDGDS
PDSPILGTFTGAEVPSHLTSNSHILRLEFQADHSMSGRGFNITYSTFGHNECPDPGIPIN
ARRFGDNFQLGSSISVICEEGFIKTQGTETITCILRDGKVMWSGPIPRCGXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXSNIYCFPTDNRSYGSKSHEXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCGGDVRGPSGTILSPGYPEFY
PNSLNCTWTVDVTHGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNLEPCEDPGIPQYGSRVGFSFGVGDSLTFS
CSLGYRLEGTSEIICLGGGRRVWSAPLPRCVXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXSVATACRDPGVPMNGTRNGDGREPGDTVVFQCDPGYELQGEERIT
CIQVENRYFWQPSPPVCIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXPCSRSTGSEGTVLSPNYPKNYSVGHNCVYSIAVPKEFVVFGQFVFFQ
TSLHDVVEVYDGPTQQSSLLSSLSGSHSGESLPLSSGNQITIRFTSVGPITAKGFHFVYQ
AVPRTSSTQCSSVPEPRFGRRIGNEFAVGSLVLFECNPGYILHGSRAIRCETVPNSLAQW
NDSLPTCIVPCGGILTKRKGTILSPGYPEPYDNNLNCVWKITVPEGAGIQXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTTIPHLLNSTSNNLYLNFQSDISVSAAGFHLEYTAIG
LDSCPEPQTPSSGVKVGDRYMVGDVVSFHCHQGYSLQGHSHITCMPGPVRRWNYPIPICL
AQCGGAMSDFSGVILSPGFPGNYPSSLDCTWTIKLPIGFXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYQLQSCPDPR
PFRNGFVIGNDFTVGQTISFECFPGYTLIGNSALTCLHGVSRNWNHPLPRCEALCGGNIT
AMNGTIYSPGYPDEYPNFQDCFWLVRVPPGNGIYINFTVLQTEPIYDFITVWDGPDQXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXDIIRYQCLPGFTLVGNAILTCRGERLQMDGAPPVCQXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTCPSINSFILEHGRWRI
VNGSHYEYKTKVVFSCDPGYHGLGPASIECLPNGTWSWRNERPYCQIISCGELPTPPNGN
KIGTQTSYGSTAIFTCDSGFMLVGSAVRECLASGLWSGSETRCLAGHCGIPEFIVNGQVI
GENYGYRDTVVYQCNPGFRLIGSSVRICQQDHNWSGQLPSCVPVSCGHPGSPIYGRTSGN
GFNFNDVVTFSCNIGYLMQGPTKAQCQANRQWSHPPPVCKVVNCSDGIPANSKRESIEHG
NFTYGTVVYDCNPGYFLFGSSVLICQPNGQWDKPLPECIMIDCGHPGVPPNAVLSGEKYT
FGSTVHYSCTGKRSLLGQSSRTCQLNGHWSGSQPHCSXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXWSGSLPNCSIISCGDPGIPANGLRYGDDYVVG
QYVSYMCQPGYTLELNGSSIRTCANGTWSGVMPTCRAVTCPAPPQISNGRLEGTNFDWGF
SISYICSPGYELSFPAVLTCVGNGTWSGEVPQCLXXXXXXXXXXXXXXXXGKSFIYQSEV
SFNCNSPFILVGSSTRICQADGTWSGSSPHCIEPTRTSCDNPGVPRHGSQNNTFGFQVGS
VVQFHCKKGYLLQGSTTRTCLPDLTWSGIQPECLXXXXXXXXXXXXXXXXXXXXXXHGYT
LIYPCQPGFFLAGTEHRVCRSDNTWTGKVPVCEXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVYKSQEARLML
HIYLVKLPAHASVKKMKEENWAMDGFVSAEPDGATYVFQGFIQGKDYGQFGLQRLGLNMS
EGSNSSNQPHGTNSSSVAIAILVPFFALIFAGFGFYLYKQRTAPKTQYTGCSVHENNNGQ
AAFENPMYDTNAKSVEGKAVRFDPNLNTVCTMV
Download sequence
Identical sequences ENSOPRP00000008486 ENSOPRP00000008486

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

Please send feedback, comments or questions to superfamily@cs.bris.ac.uk or use the feedback form.

© Copyright 2013 The SUPERFAMILY authors and Julian Gough.