SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for ENSOPRP00000004899 from Ochotona princeps 69

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSOPRP00000004899
Domain Number 1 Region: 392-653
Classification Level Classification E-value
Superfamily YWTD domain 5.62e-44
Family YWTD domain 0.00000838
Further Details:      
 
Domain Number 2 Region: 1433-1693
Classification Level Classification E-value
Superfamily YWTD domain 3.79e-43
Family YWTD domain 0.00000925
Further Details:      
 
Domain Number 3 Region: 706-960
Classification Level Classification E-value
Superfamily YWTD domain 9.94e-41
Family YWTD domain 0.0000207
Further Details:      
 
Domain Number 4 Region: 2384-2615
Classification Level Classification E-value
Superfamily YWTD domain 1.57e-36
Family YWTD domain 0.0000111
Further Details:      
 
Domain Number 5 Region: 2090-2330
Classification Level Classification E-value
Superfamily YWTD domain 3.01e-33
Family YWTD domain 0.0000249
Further Details:      
 
Domain Number 6 Region: 4049-4319
Classification Level Classification E-value
Superfamily YWTD domain 3.01e-20
Family YWTD domain 0.00041
Further Details:      
 
Domain Number 7 Region: 3361-3456
Classification Level Classification E-value
Superfamily YWTD domain 6.28e-16
Family YWTD domain 0.00051
Further Details:      
 
Domain Number 8 Region: 288-381,651-702
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0000000000000298
Family Growth factor receptor domain 0.02
Further Details:      
 
Domain Number 9 Region: 1333-1423,1694-1737
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.000000000000282
Family Growth factor receptor domain 0.014
Further Details:      
 
Domain Number 10 Region: 1260-1301
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000000484
Family LDL receptor-like module 0.00056
Further Details:      
 
Domain Number 11 Region: 1060-1099
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000131
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 12 Region: 2729-2770
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000406
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 13 Region: 26-63
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000694
Family LDL receptor-like module 0.00074
Further Details:      
 
Domain Number 14 Region: 2980-3022
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000785
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 15 Region: 2851-2890
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000131
Family LDL receptor-like module 0.00077
Further Details:      
 
Domain Number 16 Region: 3620-3659
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000144
Family LDL receptor-like module 0.00064
Further Details:      
 
Domain Number 17 Region: 2897-2933
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000236
Family LDL receptor-like module 0.00047
Further Details:      
 
Domain Number 18 Region: 215-255
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000034
Family LDL receptor-like module 0.00094
Further Details:      
 
Domain Number 19 Region: 1101-1139
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000406
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 20 Region: 3918-3956
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000419
Family LDL receptor-like module 0.00094
Further Details:      
 
Domain Number 21 Region: 3713-3747
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000654
Family LDL receptor-like module 0.00084
Further Details:      
 
Domain Number 22 Region: 66-102
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000969
Family LDL receptor-like module 0.00061
Further Details:      
 
Domain Number 23 Region: 1018-1056
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000144
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 24 Region: 3833-3869
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000209
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 25 Region: 3790-3827
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000223
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 26 Region: 3747-3786
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000223
Family LDL receptor-like module 0.00091
Further Details:      
 
Domain Number 27 Region: 181-217
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000262
Family LDL receptor-like module 0.00088
Further Details:      
 
Domain Number 28 Region: 3578-3622
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000511
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 29 Region: 106-144
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000537
Family LDL receptor-like module 0.0014
Further Details:      
 
Domain Number 30 Region: 2692-2730
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000838
Family LDL receptor-like module 0.00062
Further Details:      
 
Domain Number 31 Region: 1224-1259
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000109
Family LDL receptor-like module 0.00065
Further Details:      
 
Domain Number 32 Region: 1143-1177
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000011
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 33 Region: 3540-3581
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000157
Family LDL receptor-like module 0.0021
Further Details:      
 
Domain Number 34 Region: 3503-3538
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000017
Family LDL receptor-like module 0.0012
Further Details:      
 
Domain Number 35 Region: 3875-3913
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000393
Family LDL receptor-like module 0.0015
Further Details:      
 
Domain Number 36 Region: 1180-1218
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000183
Family LDL receptor-like module 0.002
Further Details:      
 
Domain Number 37 Region: 146-179
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000249
Family LDL receptor-like module 0.0017
Further Details:      
 
Domain Number 38 Region: 2937-2981
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000393
Family LDL receptor-like module 0.0012
Further Details:      
 
Domain Number 39 Region: 3023-3061
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000785
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 40 Region: 1305-1341
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000106
Family LDL receptor-like module 0.0035
Further Details:      
 
Domain Number 41 Region: 260-292
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000122
Family LDL receptor-like module 0.0034
Further Details:      
 
Domain Number 42 Region: 2775-2811
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000013
Family LDL receptor-like module 0.0012
Further Details:      
 
Domain Number 43 Region: 4000-4032
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000144
Family EGF-type module 0.0081
Further Details:      
 
Domain Number 44 Region: 2821-2860
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000537
Family LDL receptor-like module 0.0015
Further Details:      
 
Domain Number 45 Region: 4374-4405
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000558
Family EGF-type module 0.023
Further Details:      
 
Weak hits

Sequence:  ENSOPRP00000004899
Domain Number - Region: 3962-4000
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000153
Family EGF-type module 0.013
Further Details:      
 
Domain Number - Region: 3061-3091
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000157
Family LDL receptor-like module 0.0037
Further Details:      
 
Domain Number - Region: 2336-2380
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000314
Family EGF-type module 0.017
Further Details:      
 
Domain Number - Region: 975-1018
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0015
Family EGF-type module 0.012
Further Details:      
 
Domain Number - Region: 3460-3492
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0111
Family EGF-type module 0.019
Further Details:      
 
Domain Number - Region: 4320-4404
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0345
Family Growth factor receptor domain 0.019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOPRP00000004899   Gene: ENSOPRG00000005238   Transcript: ENSOPRT00000005336
Sequence length 4649
Comment pep:novel genescaffold:pika:GeneScaffold_407:85343:286995:-1 gene:ENSOPRG00000005238 transcript:ENSOPRT00000005336 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MELRTAAAACVLFLALSAWSVPVSGQDCSSGHFRCGSGNCIPQAWRCDGTNDCEDDSDEA
GCPHASCHPGFFQCQSDGLCVPQSWVCDGDEDCQDNSDEQHCSGSTCSSHQLTCSSGQCI
PREYRCDHISDCSDGTDEKDCQYPICDQLTCASGACYNTSQKCDGKIDCRDSSDEFNCTS
VCAHNEFQCGDGNCIPRSYVCDHDFDCDDNSDERSCIYQTCGGNQFTCSNGRCIHQHWVC
DGQADCDDQGDEEGCDGSHPKCYPRQWACPRSGKCIPISKVCDGILDCPGGEYKNSTTAG
RSCSMTMCPTLNCEFQCHQTPYGGSCFCPPATIINHNDNRTCVGFNDCQIWGICDQKCEY
QLGHHRCQCEDGYILEREQHCKANASFVEASVIFSNGRDLLIGDIHGRSFQILVQSQHRG
MAVGVDFHYHLHRVFWTDTVQDKVFSVDITGLNVQEVLDVSVEAAENLAVDWINDKLYLV
ETKVSRIDVVNLDGSQRLTLITEDLGRPRGIAVDPVVGYLFFSDWASLSGEPKLERAFMD
GSNRKDLVKTKLGWPAGITLDLVSKRVYWVDCRFDYIETVTYDGIQRKTVIRGGSRVPHP
FGISLFEGHVFFTDWTKMAVMKANKFTETNPQVFYQSSLRTHGVTVYHALRQPNATNPCR
GNNGGCEQVCLLSHRTDNGGLGYRCKCLFGFQLDTDERHCVAVKSFLIFSLGSAVRGIPF
FRSAQEDVMVPLTNSLSFFVGIDFDAQERAIFYSDTSRNMIYKQKIDGTGREIITANRVE
NVESLAFDWISRNLYWIDPSYRSVSVMKLADKSRRTIVEHLNNPRAIVVHPVAGYIFFSD
WFRPAKILRAWGDGSHLVPIVNTTIGWPNGLAIDWGTSRLYWVDAFFDTIEHSTFDDLDR
RKLSHIPQMTHPFGITVFQNYVFVTDWALKGIIQVRKTDGRDMTIVRSGINNIMHVKSYD
VSIQIGSNFCNQSTHPNGDCSHFCFPVPNFQRVCGCPYGMRLASNHLTCEGDPVNEPPTQ
QCGAFSFSCDNGKCIPSYYRCDGFNDCHDNSDEHLCGTSNITCSPSAFTCGDGECIPAHW
RCDRRNDCLDGSDEHNCSTQTPTSCPAYSYTCDNNACIPRNWVCDTDNDCGDGSDEKNCQ
STGTCRPTQFHCPDHRCLDPSFVCDGDKDCVDGSDEACVFNCTSSQFKCADGNGCISNIN
RCDGVFHCNDHSDEAGCPTRPAGMCHSDEFQCQADGYCIPDVWECDGHSDCADGSDEHHG
CVPKTCTVSEFRCHNGNCIPQSWLCDGDNDCRDMSDEKDCPTQPFHCLSWQWQCPGYNIC
VNLSALCDNVFDCPNGTDESPLCSQASCSDFNGGCTHQCIQGPFGATCLCPVGYQLANDS
KTCEDINECDIPGFCSQHCFNMRGSFRCSCDKEYVLESDGRTCKAIASENLLLLVASQSQ
IVADNITSGIHNIYSLVHDGSNIVAVDFDSVSGRIFWSDANQGKTCSAFQNGTDRRVVID
SGVAMTQSVAVDWIGCNLYWTDYALETIEVSRIDGSHRTVLISKNVSNPRGLALDPRMSD
HLMFWSDWGHHPRIERASMDGSMRTIIVQNKIALPCGLTIDYPNRLLYFMDSYLDYIDVC
DYYGHHRRQVVASDLVLRYPYALSLFEDTMYWTDTTTHQVMKANKWHGANQSVVMFNVHQ
PLGIVVVHPSKQPESVNPCASAHCSHLCLLSSQGPNFYSCVCPSGWNLSHDSVNCVRXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTLRGEARYRKMLITNDG
TALGVGFPIGITVDPVRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNALHVDVDVA
SGFIYWCDFSSSVRSYNAIHRIKPDGSSFTSLITNGIGANGVRSIAVDWVAGNLYFTNAF
VSETLIEVLRINTTYRRILLKVTVDMPRHIVVDPKNRYLFWADYGQKPKIERSLLDCTNR
TVLVSDGIVTPRGLAVDRSNGYIYWVDDSLDIIARIHPNGGESEVVRYGSRYPTPYGITV
FQDSIIWVDRNLKKIFQASKEPANTQSPTVIRDNINWLRDVTIFDEHVQPRSPSEVNNNP
CLENNGGCSHLCFALPGLSTAKCGCAFGTLQSDGKSCAISTENFLIFAMGNSLRSLHLDP
ENHSPPFQEIDVQRTAIAVDYDNINNRFYFTQQVTSGRGQISYISLYSGSQSPTVIASDI
GTPDGIAFDWINKRIYYSDYSNQTINSMAEDGSNRTIIARVPKPRAIVLDPCRGYMYWTD
WSTNAKIERATLGGNFRIPIVNTSLVWPNGLTLDYETDLLYWADASLQKIERSSLTGTER
EVIINTAFHAFGLTIYDQYIYTDFYTQRIYRANKYXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXPNGAECQCPHEGQWYLANNGKHCIVDSGTRCAEFQFT
CLNGRCIQEQWKCDNDNDCGDNSDELQNVCAFHTCPPTAFTCANGRCVHYHYRCDYYNDC
GDNSDEAGCLFRRCNDTTEFTCSNGRCIPQSFVCDGRNNCHDNDTSDEKHCXXXXXXXXX
XXCQNTNICIPRLYLCDGDNDCGDLSDENPTYCTTHTCASNEFQCSSGRCSPQHWHCDQE
VDCPDGSDEPASCAQHPRTCSSNEYRCDSGRCIPKEWICDGDNDCGDMSDEDQRHHCETH
NCSSSEFLCVNNRPPARRCISRAWICDGDADCVDAADEHQNCTRRSCSANEFTCWNGLCI
PQSFRCDRRNDCGDYSDERDCTYATCHVSEFTCQNGRCINKAFVCDGQNDCDQTDETEHL
CHIPETCPPHQFKCDNGHCIEMVKVCNHLDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XAITIDYTNDHLYWADAHLGYIEYSDLEGRRRHTVYDGTLPHPFAITIFEDTIYWTDWNT
RTVEKGNKYDGSGRVVLVNTTHRPFDIHVYHPYRQPIVNNPCGINNGGCSHLCLIKEGGN
GFTCECPDDFQTVRMGGSTHCLPMCSSTQFLCANNEKCIPIXXXCDGQRDCSDGSDESFL
CPQRYCRLGRFQCKDGNCTSPHALCNAHQDCPDGSDEDHALCDNHRCESNEWQCANKRCI
PEAWQCDTVDDCGDNSDEDSSHCASRTCHPGQFKCDNGRCIPSSWKCDVDNDCGDHSDEP
LHECXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDITCDPLGDFRC
RNHHCIPLRWRCDGHNDCGDNSDEESCAPRECTESEFRCASQQCIPSQWICDQDNDCGDN
SDERDCDVRTCHPDYFQCTSGHCVLNHLKCDGRADCLDASDEATCPTRFPNGTYCPATMF
ECKNHVCIQSFWKCDGDNDCGDGSDEELHLCLGVPCDPPNRFRCDNSRCIYSHQRCNGID
DCGDGTDEKEENCRPPTPRPCTQDEFKCSNERCISQHYVCDDVDDCGDRSDEMGCNLGQN
RTCAENLCEHNCTELSGGGFICSCKPGYRAGVLDRNFCLDINECEQFGVCPQKCQNTKGS
YECFCADGFKSMSVRYGERCAADGDPPLLLLPENVRIRKYNVSSEKFSDYLEDEERIQAV
DYDWDPEGIGLSVVYYTVLAQGSEFGAIKRAYIPNFESGSNNLIHEEDLGLKYIMQPDGL
AVDWVGRHIYWSDAKNQRIEVARLDGRYRKWLITTQLDQPATIVVNPKLGXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTGLSIDYLNNDQIYWSDMKEDIIETIKYDGSDRRII
SQGVVKPYSLDIFEDQLYWVAKENGEVWKQDKFGKGEKEKMLVVNPWLTQVRVFHQLRYN
KSVLNPCKQVCSHLCLLRPGGYSCACPQGSNFLEGSTTECDAAIELPITMPPPCRCMYGG
TCYFDENDLPKCKCASGYTGQYCEIGFSKGVPPGTTAMAVLLTILLIAIVGALATVAFFH
YRKTGSLLPSLPKLPSLSSLVKPSENGNGVTFRSGVDDNMEIGVSGFGPESVIDTAMSLS
DHFALELGKQPVIFENPMYATRDSAMKAALPPEVVVTGNVDNKNYGVAMDPLEPVPETAA
VSPGADGFQIPKWNIFKRKPKQTTNFENPIYAEMDNGQKEGDAVAPPPSPSFPEKISPKR
GATAAYSATEDTFKDTANLVKAVKDDSEV
Download sequence
Identical sequences ENSOPRP00000004899 ENSOPRP00000004899

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