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Domain assignment for ENSOPRP00000012378 from Ochotona princeps 69

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSOPRP00000012378
Domain Number 1 Region: 36-153
Classification Level Classification E-value
Superfamily TPR-like 2.18e-19
Family Tetratricopeptide repeat (TPR) 0.0089
Further Details:      
 
Domain Number 2 Region: 845-883
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000162
Family Classic zinc finger, C2H2 0.054
Further Details:      
 
Domain Number 3 Region: 898-931
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.0000765
Family CCCH zinc finger 0.0051
Further Details:      
 
Domain Number 4 Region: 495-524
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.0000824
Family CCCH zinc finger 0.005
Further Details:      
 
Weak hits

Sequence:  ENSOPRP00000012378
Domain Number - Region: 768-800
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.000159
Family CCCH zinc finger 0.0069
Further Details:      
 
Domain Number - Region: 624-655
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.00255
Family CCCH zinc finger 0.0065
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOPRP00000012378   Gene: ENSOPRG00000013540   Transcript: ENSOPRT00000013566
Sequence length 990
Comment pep:novel genescaffold:pika:GeneScaffold_749:13745:37215:1 gene:ENSOPRG00000013540 transcript:ENSOPRT00000013566 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MERQKRKADIEKGLQFIQSTLPLKQEEYEAFLLKLVQNLFAEGNDLFREKDYKQALVQYM
EGLNVADYAASDQVALPRELLCKLHVNRAACYFTMGLYEKALEDSEKALGLDGESIRALF
RKARALNELGRHKEAYECSSRCSLALPHDESVTQLGQELAQKLGLRVRKAYKRPQELETF
SLLSNGNAAGMTDQGTSNGLGSIDDIETGSVCNRGGVEAGVCYVDLHGSPALLPTAPTTP
LFPHVLDLLAPLDSGIRALPGSESLDDFSDGDVFGPELDTLLDSLPLVQGGLPGSGVPSE
LPKLILVFPGGTPLLPPVVGGSIPDSSPLPPASFGLVMNPSRKLAASVLDVLEPPGPTLD
ALNLLPYSETRLDTLETFESTRSSLDKPDSFLEETNSQDHQPPGSAQKPVPSPEPSMPNT
ALLIKNPLAATHEFKQACQLCYPKTGPRAGDYTYREGLEHKCKRDILLGRLRSAEDQAWK
RIRPRPTKTSFVGSYYLCKDMINKQDCKYGDNCTFAYHQEEIDVWTEERKGTLNRDLLFD
PLGGVKRGSLTIAKLLKEHQGIFTFLCEICFDSKPRIISKGTKDSPSVCSNLAAKHSFYN
NKCLVHIVRSTSLKYSKIRQFQEHFQFDVCRHEVRYGCLREDSCHFAHSFIELKVWLLQQ
YSGMTHEDIVQESKKHWQQMEAHASKASGGLGVPRSHGPSTFDLQMKFVCGQCWRNGQVV
EPDKDLKYCSAKARHCWTKERRVLLVMSKAKRKWVSVRPLPSIRNFPQQYDLCIHAQNGR
KCQYVGNCSFAHSPEERDMWTFMKENKILDMQQTYDMWLKKHNPGKPGEGTPISSREGEK
QIQMPTDYADIMMGYHCWLCGKNSNSKKQWQQHIQSEKHKEKVFTSDSDASGWTFRFPMG
EFRLCDRLQKGKVCPDGDKCRCAHGQAELSEWLDRREVLKQKLAKARKDMLLCPRDDDFG
RYNFLLQEDGDAARAAPEAPAAATIATTGE
Download sequence
Identical sequences ENSOPRP00000012378 ENSOPRP00000012378

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