SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSOPRP00000014353 from Ochotona princeps 69

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSOPRP00000014353
Domain Number 1 Region: 149-480
Classification Level Classification E-value
Superfamily Sema domain 4.05e-125
Family Sema domain 0.0000000225
Further Details:      
 
Domain Number 2 Region: 39-97
Classification Level Classification E-value
Superfamily Sema domain 0.000000107
Family Sema domain 0.0051
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOPRP00000014353   Gene: ENSOPRG00000015705   Transcript: ENSOPRT00000015711
Sequence length 832
Comment pep:novel genescaffold:pika:GeneScaffold_2225:517530:524944:-1 gene:ENSOPRG00000015705 transcript:ENSOPRT00000015711 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAPHWAVWLLAAGLWGLGIGAEVWWNLVPRKTVSSGELATVVRRFSQVGIQDFLTLTLTE
QTGLLYVGAREVLFAFSVEAMELQGAISWEAPAEKKTXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXFTLQRGDLEDGKGKCPYDPAKGHTGLLVDGELYSAT
LNNFLGTEPVILRNMGPRHSMKTEYLASWLNEPHFVASVYIPESVGSFTGDDDKIYFFFS
ERAVEYDCYAEQVVARVARICKGDVGGARTLQKKWTTFLKARLLCSAPEWQLYFNRLQAI
HTLQGASWHNTTFFGVFRARWGDVDVSAVCEYQLEEIQQVFEGPYKEFQEQAQKWGRYTD
PVPSPRPGSCINNWHRRHGYTSSLELPDNTLNFIKKHPLMEEQVGPRWGRPLLVKKDTNF
TRLVADQVTGLDGATYTVLFIGTGDGWLLKAVNLGSWVHLIEELQLFDREPVESLVLSQS
KXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAERTVYPLELPKEPTSTPFR
PGPETDEKLWDPVGYYYSDGSLKIVPGHARCQPGGGPPSPPPGMPGQPLPSPTRLHLGGG
RNSNANGYVRLQLGGEDRGSLGHPLPELADELRRKLQQRQPLPDSNPEESSV
Download sequence
Identical sequences ENSOPRP00000014353 ENSOPRP00000014353

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]