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Domain assignment for Carubv10006696m|PACid:20895811 from Capsella rubella v183

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Carubv10006696m|PACid:20895811
Domain Number 1 Region: 276-377
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 4.51e-20
Family B3 DNA binding domain 0.01
Further Details:      
 
Domain Number 2 Region: 157-250
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 1.75e-17
Family B3 DNA binding domain 0.0043
Further Details:      
 
Domain Number 3 Region: 30-88
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 0.000000000184
Family B3 DNA binding domain 0.0039
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Carubv10006696m|PACid:20895811
Sequence length 489
Sequence
MADPPRFSLFHQKFLTGDKPLLTLHAEFLMNHMKVSLISDASDKVWKVKLDGGRLADGWE
EFTGEHKFRDGDVLVFKHQGDDVFHVSVASGSVSGDIHHASSSHVDTEDTCIADDYVDDD
DDDDDDDETNDDDDDDGESKDAADIDDDGDGNRARCVTRYSLNKDRLDLSRKYTVLFGEH
QKACEIDVMNEQGRIWTMKLAKNISSGVFYIRAGWEHFCFTNDLKQGDLCKFKLFQNGKK
PVLWLCPQEPGNDHKEKRTLDEVSKAKEKKAPSPTVIVKYTPSRDSTGQLSLPVSFTREY
GIKKAGDVILLNQDGRKWSSYLQITGLGRGGSEWFYLRKGWREMCEANGVKVNDSFKLEL
MWNGETPMFKFCSKIDNHEYKGKGNQKTCKKRACETAPQPRNVKKTPRVGVEGQVNKRIS
SGPLQPQSFSVSDQVASVKQGIVDTLNTVRQCRTELETSEQNLQASLLAIDALGERIWGI
SKILSNNLI
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Identical sequences R0F969
XP_006285313.1.15642 Carubv10006696m|PACid:20895811

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