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Domain assignment for Carubv10016844m|PACid:20888610 from Capsella rubella v183

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Carubv10016844m|PACid:20888610
Domain Number 1 Region: 81-173
Classification Level Classification E-value
Superfamily PA domain 0.000000353
Family PA domain 0.018
Further Details:      
 
Weak hits

Sequence:  Carubv10016844m|PACid:20888610
Domain Number - Region: 515-557
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000163
Family EGF-type module 0.009
Further Details:      
 
Domain Number - Region: 414-557
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0377
Family Growth factor receptor domain 0.013
Further Details:      
 
Domain Number - Region: 288-391
Classification Level Classification E-value
Superfamily Thioredoxin-like 0.0805
Family Thioltransferase 0.061
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Carubv10016844m|PACid:20888610
Sequence length 626
Sequence
MGQEKLGFFTLSFLLILNLALGRFVVEKNNLKVTSPESIKGVYECAIGNFGVPQYGGTLV
GTVVYPKSNQKACKSYNDFDISFKSKPGRLPTFVLIDRGDCFFTLKAWTAQQAGAAAILV
ADSKAEPLITMDTPEEDKSDADYLQNITIPSALITKSLGDSIKSALSGGDMVNMKLDWTE
SVPHPDERVEYELWTNSNDVCGKKCDTQIDFLKNFKGAAQILEKGGHTQFTPHYITWYCP
EAFTLSKQCKSQCINHGRYCAPDPEQDFTKGYDGKDVVVQNLRQACVYRVMNETGKPWVW
WDYVTDFAIRCPMKEKKYTKECADGIIKSLGIDLKKVDKCIGDPEADVENPVLKAEQESQ
IGKGSRGDVTILPTLVVNNRQYRGKLEKGAVLKAMCSGFQESTEPAICLTEDLETNECLE
NNGGCWQDKAANITACRDTFRGRLCECPTVQGVKFAGDGYTHCKASGALHCGINNGGCWR
ETRGGFTYSACVDDHSKDCKCPHGFKGDGVKSCEDVDECKEKKVCQCPDCKCKNTWGSYE
CSCNNGLLYMREHDTCIGSGKVGTTKLSWSFLWILIIGVGVAGLSGYAVYKYRIRSYMDA
EIRGIMAQYMPLESQPPNTSGPHMDI
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Identical sequences R0FNL0
Carubv10016844m|PACid:20888610 XP_006290748.1.15642

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