SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for PGTT_02962 from Puccinia graminis f. sp. tritici CRL 75-36-700-3

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  PGTT_02962
Domain Number 1 Region: 8-113
Classification Level Classification E-value
Superfamily ARM repeat 0.00000806
Family PBS lyase HEAT-like repeat 0.044
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) PGTT_02962
Sequence length 1210
Comment | PGTG_02962 | Puccinia graminis f. sp. tritici predicted protein (1211 aa)
Sequence
MFLFTSGAILRRRIAWVLGQFAKQDLDRKLQSSVYVALSCLLENPSNDIAVKLATCRALK
ATANWEAVEPEPDTILPHLEMFIKQISGLLSSVENLESQKILTETLRLVIENSYSLIRFI
PPSQLSGHHHPSLVNTSNNSNTNTNTNNNINNNNQQFHYLSRITRGRSFKPPVTDCQPIP
KEFSHLVSQQWPTTFRRSTTYHQYHQDLYSTLDHEHKDSTLARTGEETNDQTDLGEEAIT
DNRIRRTWHNGSLTRQEIHSLEEVVEEIEREKRQQGNMANPEDSSMDQSAIIQEQQEKIS
RMESSMAEMKEMMKSFFSQSASPRGPPLPETPSPRIQNLRFGTSTPYTGRIPGLETTIGA
GEQSIPTSAIQSPGFEQTRVRTEIKLPDEQRGVVLDTKKTNLYFEGTEVELFIKRVEKVA
VLQKAGGRDVAFQLPFIISNRKISEAIEQMEGHETGNWELLKKELIRKWGRATPLRRYKE
DSIPRLIRKAQENGGINTRLEYKKFISEFEEIMDYFTRMEYQNLNPDSGNPLWKALSTEL
KKEVTKELAHAKQLQTTKDGRNIVPDLEKLKKYVEIALIIVDFDGDDEEYKPKGAGQKDG
QDSGTSHQGRLRRKAYKVNFRLGISESPSTTTTPRYGPLECFYCKERHVVTQCEYLNQDM
QDRKVYKSQGTYYYPNRQAIVLDKDSSVRELVRKFAEEQSTSSNPPPKEAVKESTSAVAE
IEEWGSWVPPQVNMEEGDLQNNLGFGLRKSQRLQEKNAPSGSQPAPSNPVGTEGQPSNIQ
DEGPKTAARRESFPGSWLEDNDDEEEEERIIIPTKAKTRPVPPAKEKQARTETADKQKEI
IGKLDKSLKAKFYRQSYTLTLEEILKISPNFLQSLHAVQPEEDLAERGLNSVKFNCATNT
SMDNEEQDSGLTNIHAVEGNRGTFYTNYWDCGEHVSVFPGHIHLANFFIVKGSVHTVIGR
PFLADHNIRLELSSQKGEVLSFLDTDQRRLCIPKCLPNTPGWHKEPPKLRQVCTFQVDEW
EAESISSKDFDLQEKMEEYNKTIPLLNEDPWQVVLSEPVDWAQELGAAEVDEAAWDMFHQ
INSTVWGTNVDPERDAWSLYKEEVWLHPRFKEVFTWPTQKRSLRRSPLWSQELPGGGLGS
LDFFQILTTEAADSFLQYGTWNSRYGPVSIAIRQRLYGGGAKKWYKKHISRSYKAKSIRN
ASFGGYQFFI
Download sequence
Identical sequences PGTT_02962

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]