SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for PGTT_13869 from Puccinia graminis f. sp. tritici CRL 75-36-700-3

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  PGTT_13869
Domain Number 1 Region: 689-756,794-810,857-1035
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1e-57
Family Tandem AAA-ATPase domain 0.00045
Further Details:      
 
Domain Number 2 Region: 407-611,643-685
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.2e-48
Family Tandem AAA-ATPase domain 0.00018
Further Details:      
 
Domain Number 3 Region: 784-833
Classification Level Classification E-value
Superfamily RING/U-box 0.00000000000000442
Family RING finger domain, C3HC4 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) PGTT_13869
Sequence length 1036
Comment | PGTG_13869 | Puccinia graminis f. sp. tritici DNA repair protein RAD5 (1037 aa)
Sequence
MAKASAKTPAPRRSARLSNCLTKTPPTRKDLDPEFTEPSSVESCDLKTTSKNKRKRPADN
EVPRSVAQGSKAKTARRGHSFPMKAAKDEQPTRVAKRTKSVSSHYFQADKSETAKVGKSS
EPLKDAADRDSSDESDAKIINKIITAKNKGKAPQTESQAHHDPASDHTKIADRVPASKKE
LISSMEHQKASSHTQTANTSKSKGKGKARQIDTTSEEESESDDQIVLARPRPNGRKSATP
RFKPVESDEDPLEIETEMVKAAIKLSKEESKSTAPNSTSASRPIRSSSTKVTTSKHRNML
AEIDKEDDQDSDFEVKFDQDNRSSLSTLDSDSDSSEESDSDADIPGHQPTKSAQTTVAPK
IRRTRRSVKIPKHLTWWQRNQMKLEAHHPELINVWGDLGQKVEVVQPSKAEQPDGLELTL
LPFQLEGLYWMKKQETGPWSGGVLADEMGMGKTIQTIALILSDRVPGHRKQTLVIAPTVA
IMQWRNEIEKFAKGLTVNVWHGGNRSNAQEEMENFDVVLTSFAVLESAFRRQNSGFRRKG
QIIKESSLLHQINWHRVILDEAHNIKDRSCNTAKGAFELKATYRWCLSGTPLQNRVGELY
SLIRFLGADPFSYYFCKLCDCKSLHWSFSDRRSCDQLSAFLFSTVYVFPSKWQPVQKYGA
SVVGSHGHTAFNKLKVLLDRMMLRRTKLERADDLGLPPRAVLVRRDYFTEEEEELYSSLY
SDVTRKFSTLNNYGNIFQLITRMRQMSNHPDLVLKSRAAQAAFKTIGDANAPNTDLNQLT
SIQTCRICLDEAEDAIISKCRHIFCRECIRQYLETATEQEPECPVCHLPITIDLSQDALE
DENMGSKARQGVLDRLDPGKWRTSTKIEALVEELSKLNQSDHTIKSIVFSQFTVFLDLIE
RRLQLAGFKLARLQGNMTPEARNRTIQYFMNNNDVQVFLVSLKAGGVALNLTEASRVFIM
DPWWNPAVELQAMDRIHRLGQHRPVVVTRLIIENSIESRIVELQKKKEAMTGAALGDDDQ
ALGRLTPEDLSFLFTL
Download sequence
Identical sequences PGTT_13869

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]