SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for PGTT_14290 from Puccinia graminis f. sp. tritici CRL 75-36-700-3

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  PGTT_14290
Domain Number 1 Region: 19-217
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 9.46e-17
Family Tandem AAA-ATPase domain 0.0071
Further Details:      
 
Weak hits

Sequence:  PGTT_14290
Domain Number - Region: 141-326
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.00254
Family RNA helicase 0.057
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) PGTT_14290
Sequence length 581
Comment | PGTG_14290 | Puccinia graminis f. sp. tritici ATP-dependent DNA helicase recQ (582 aa)
Sequence
MNKTNLREKIKKDAENSYKGQIPKEQQLDAVMSLVQLQHTFVMAGTGFGKTRIAEMYLNL
FTAQDGVVLVLNPLDALGDNQVAEKIAQGYTAINLAKMTFNQSLSDEILAGVYKFVYLSP
ETFVDNDLFVSLYYKREFQARLALIVIDEAHIIYSWGLVASGEAKKSSAHLRTHDVAAFR
PSYGNMAAQLMANEGVPILFLSATCRPEARKAIFENLKLDSDNVTIIHAELTRPEIRILR
FPMEYPLKKAYDLLQLFGPKDEIPDCDLPPTLIYSGTRNATGQILKVVNEARGTIGGEKN
PRSTLIRRYHAVTGNLDKVDTISGFEAAEFPSISYLDIFLEEADRLRKHMAKMNLENFLT
MCENAKDLEDVEYVLNKKKKTTRVKNKTKMTPMLDALSDTLLKDFSEFFDNLFVESSTYV
AEDLFDRNAADSIAKNLDQITTPSSIAIEKERLENKMEQKKINTEAKKQADAEHRRVQAA
KKKEAAEQEKQRKAEDKAYKKEMDSREKERIAQEKADKKKLDQEEKLQKALEKAEATRLE
KGRKQFERDEKDKEKKRKAEEVKLERQIKKQKKMYLRQHPK
Download sequence
Identical sequences PGTT_14290

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]