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Domain assignment for Gorai.007G347300.2|PACid:26782980 from Gossypium raimondii v221

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Gorai.007G347300.2|PACid:26782980
Domain Number 1 Region: 262-411
Classification Level Classification E-value
Superfamily Sigma2 domain of RNA polymerase sigma factors 9.89e-45
Family Sigma2 domain of RNA polymerase sigma factors 0.00012
Further Details:      
 
Domain Number 2 Region: 409-461
Classification Level Classification E-value
Superfamily Sigma3 and sigma4 domains of RNA polymerase sigma factors 0.0000000000567
Family Sigma3 domain 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Gorai.007G347300.2|PACid:26782980
Sequence length 498
Sequence
MSCLLPQFKCQPDTFSIQFRAHHSHHSKHKESICFRSQCVLSTTSSTSMATTAVLDVEKL
RLPSFEAHSNSVVTDRPWTYTGATGPPSEASFGATLATENLLTSDEAVIAAAAAEAVALA
RAAAKVAKDAAIMVKNHGSAKTEMKSPGSSATDTLTSKWGLFTEAERAGIVGDYVSDELE
LEEDHLEQNSTKESDELEPTNEELKLLEEQLSRSIAVRSHRQTERKAKRTRAAEKAATNV
VSVKSGSTNRKRRGALQDIDYSDPLRYLRGTTNTSKLLTANEELELSEGIQDLLKLEGLH
EELAERCGRPPTFAQWAAAAEVDRKTLRERLNYGTICMDKMIKSNIRLVISIAKNYQGAG
MNLQDLVQEGCRGLIRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVE
ATYRVKEARKQLFSENGRQPDNIEVAEATGLSMKRLTAVLLAPKAPRSLDQKIGINQNLK
PSVRPISHAAITIPFSHF
Download sequence
Identical sequences A0A0D2SPM7
Gorai.007G347300.2|PACid:26782980

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