SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Gorai.008G071600.2|PACid:26816864 from Gossypium raimondii v221

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Gorai.008G071600.2|PACid:26816864
Domain Number 1 Region: 58-150
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 3.92e-24
Family B3 DNA binding domain 0.0034
Further Details:      
 
Domain Number 2 Region: 236-336
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 4.32e-20
Family B3 DNA binding domain 0.0057
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Gorai.008G071600.2|PACid:26816864
Sequence length 346
Sequence
MRIDASNQHEQNSKLEVLSSGTSPDAQRSVKTKAFSCVQRLAAIEKAHAVQIASAFESTE
NPVFMIVMQPSYVRGRMFIPSDFARKFLTVHKSNLTLCNSTGKTWHAKLYYPANKKPNAH
LYGGWREFVEDNHLNVGDICVFELIKYPEILMKTRSSVQHCKMTRTSLSGSIQAKGIKHE
KGKSLNFQYSTEELGGGLKNSAKGDSGRKSGARRCLKPDPVYQKRRACTGGGAFRTSNPS
FSVVIHPSHVGSCSTVHIPEEFGKRYLKKSGEMMLRVADGRSWNVEYERRGRSKGRKAVF
GGKSWGQFAMDNELEVGDVCVFELMNENGNLLEVVIHRKLLLVEIN
Download sequence
Identical sequences A0A0D2T1X7
Gorai.008G071600.2|PACid:26816864 Gorai.008G071600.3|PACid:26816863

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]