SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for PGSC0003DMP400008837 from Solanum tuberosum

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  PGSC0003DMP400008837
Domain Number 1 Region: 286-436
Classification Level Classification E-value
Superfamily ADP-ribosylation 3.93e-19
Family Poly(ADP-ribose) polymerase, C-terminal domain 0.025
Further Details:      
 
Weak hits

Sequence:  PGSC0003DMP400008837
Domain Number - Region: 94-152
Classification Level Classification E-value
Superfamily WWE domain 0.000419
Family WWE domain 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) PGSC0003DMP400008837
Sequence length 510
Comment PGSC0003DMT400012724
Sequence
MSIASVGSCAPMIAGDEVDSISAVFNGNKVEIVIPFERAAGGSGDDGVYETKVRVEVPIP
RNWLIPSARSTDHSQLLVQNHRNFKESGMPVRFMVFKDGSWVDFEKKAMDVLVSAFVSGE
AMVEMEMEGCKLIFDFYRMIGINLDSGNELPIAWIDVGGKGFYPKVFIEGSENLDKNEVN
VDEKFSSENRKIELEIKIIERNSAGDELGKRKRESEEKEVVREVGSSSRNVIEQRVVSAP
TELLPPKWPRTRSLGNEEENYRKVRGLLFSVLKADVTVTAVHQCTRTGPVEQARFEVFRN
NVQIVKRARGDARVGYAWYGTSLAKMDSIMWRGFQMQRIVPGYHTHGVGIYLSPLCSPQN
SEMMCEIDENGEKHIMLCRVILGKLEKVELGSQQLFPSSADFDTGVDDLINPKLHVVWCS
NMNTHILPLFIVSYKSGFHMSGRLNGGAHAHSALILLKLQSSLPPPKILEFQSLYSSYQE
GKVGKEIFMTQLRSLVGEDLLHSIIQEVHG
Download sequence
Identical sequences M1A1N8
PGSC0003DMP400008837 XP_006356803.1.80749

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]