SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for PGSC0003DMP400040261 from Solanum tuberosum

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  PGSC0003DMP400040261
Domain Number 1 Region: 682-952
Classification Level Classification E-value
Superfamily Protein kinase-like (PK-like) 7.28e-70
Family Protein kinases, catalytic subunit 0.00016
Further Details:      
 
Domain Number 2 Region: 255-563
Classification Level Classification E-value
Superfamily RNI-like 1.02e-56
Family 28-residue LRR 0.05
Further Details:      
 
Domain Number 3 Region: 52-302
Classification Level Classification E-value
Superfamily L domain-like 5.27e-45
Family Polygalacturonase inhibiting protein PGIP 0.00073
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) PGSC0003DMP400040261
Sequence length 957
Comment PGSC0003DMT400059855
Sequence
MSRIQTLHSLQILVIFLKFLVFSNSLSVETEALLEFKKHLVDPLNVLESWKYSDSPCKFY
GIQCDKHTGLVTEISLDNKSLYGIISPSISVLQSLTSLVLPSNYLSGNLPSELADCTNLK
VLNVTDNNMNGTIPDLSSLAKLEVLDLSDNCFSGKFPAWFGKLTSLVALGLGGNEYDEGK
LPDLFGKLKKVYWLFLAGSNLTGQIPESIFEMKALGTLDISKNQISGNFPKSINKLRNLF
KIELYQNNLTGELPVELVDLIHLQEIDVSRNQLHGTLPKGIDNLKNITVFQIFKNNFSGE
IPPGFGDLQHLNGFAVYNNSFTGEIPANLGRFSPLNSIDISENKFSGAFPKYLCQNNNLQ
NLLAVENSFTGEFPGNYASCKTLMRLRVSQNQLSGRIAEGLWGLPEVTMIDFSDNNFTGT
VSPGIGAATKLNQLVLSNNRFAGELPKELGKLTQLERLYLDNNEFSGIIPSELGSLKQIS
SLYLEKNSLSGSIPSELGEFPRLANLNLASNLLTGNIPNSLSMMASLNSLNLSSNKLSGS
IPTSLDNLKLSSLDLSNNQLTGRVPTDLLTVGGETAFIGNKGLCVDQSIRNVRRNSSIGA
CSGKAAQEVFMKSKLVVFCIVLLSLAVLMGVFMLVSYWKYKCNAEADSEKCLGHSNGMNP
KWKLESFQHVELDIDEICDVGEDKLVGSGGTGKVYRLDLKKGCGTVAVKQLWKGNEVKVL
TREMDILGKIRHRNIVKLYASLMREGSNMLVFEYLPNGNLFEALHREVKAGKTELDWYQR
YKIAVGTAKGIAYLHHDCVPPIIHRDIKSTNILLDEEYEAKVSDFGVAKVSEISSRVSEF
SCFAGTHGYLAPEIAYTSRVTEKSDVYSFGVVLLELVTGRKPIEETYGEGKDLVYWASTH
LNDKGSVLNILDQKVVSELIQDDMIKVLRISALCTTKLPNLRPSMKEVVNMLVDAEP
Download sequence
Identical sequences M1C4U5
PGSC0003DMP400040261 XP_006350342.1.80749

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]