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Domain assignment for gi|14521780|ref|NP_127256.1| from Pyrococcus abyssi GE5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|14521780|ref|NP_127256.1|
Domain Number 1 Region: 776-949
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 8.34e-44
Family ATP-dependent protease Lon (La), catalytic domain 0.0000537
Further Details:      
 
Domain Number 2 Region: 38-110,543-750
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 2.18e-38
Family Extended AAA-ATPase domain 0.017
Further Details:      
 
Domain Number 3 Region: 221-339,518-554
Classification Level Classification E-value
Superfamily Hedgehog/intein (Hint) domain 0.00000000000000432
Family Intein (protein splicing domain) 0.022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|14521780|ref|NP_127256.1|
Sequence length 998
Comment ATP-dependent protease La [Pyrococcus abyssi GE5]
Sequence
MLKFYKMGIKRLSGEMTMGEERMDLGIEFETTEEIPVPERLIDQVIGQDHAVEVIKTAAK
QRRHVLLIGEPGTGKSMLGQAMAELLPTEDLEDILVFPNPEDENMPRIKTVPAGQGRRIV
EEYKRKAKEQENIRFYLLFFVFFIVAMAVFMSRGDPNTLLLGVFVILIALMVTANMRFRT
QAMVPKLLVDNSGRKRAPFVDATGAHAGALLGDVRHDPFQCFSGEETVVIRENGEVKVLR
LKDFVEKALEKPSGEGLDGDVKVVYHDFRNENVEVLTKDGFTKLLYANKRIGKQKLRRVV
NLEKDYWFALTPDHKVYTTDGLKEAGEITEKDELISVPITVFDCEDEDLKKIGLLPLTSD
DERLRKIATLMGILFNGGSIDEGLGVLTLKSERSVIEKFVITLKELFGKFEYEIIKEENT
ILKTRDPRIIKFLVGLGAPIEGKDLKMPWWVKLKPSLFLAFLEGFRAHIVEQLVDDPNKN
LPFFQELSWYLGLFGIKADIKVEEVGDKHKIIFDAGRLDVDKQFIETWEDVEVTYNLTTE
KGNLLANGLFVKNSGGLGTPAHLRVEPGMIHRAHKGVLFIDEIATLSLKMQQSLLTAMQE
KKFPITGQSELSSGAMVRTEPVPCDFILVAAGNLDTIEKMHPALRSRIRGYGYEVYMRTT
MPDTVENRRKLVQFVAQEVKKDGRIPHFTRDAVEEIIREAQRRAGRKGHLTLRLRDLGGV
VRAAGDIAVRKGKKYVTREDVLEALQMAKPLEKQLADWYIERKKEYQVIRTEGGEIGRVN
GLAIIGEQSGIVLPIEAIVAPAASKEEGKIIVTGKLGEIAREAVLNVSAIIKRYKGEDIS
RYDIHVQFLQTYEGVEGDSASISVATAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVT
PKIEAAIEAGIKKVIIPKANEKDVFLSPDKREKIEIIPVERIDEVLEVALVESEKKKELI
KRIRETLPLGVSESAGSETLHEHGRDSGSALSVEESKA
Download sequence
Identical sequences Q9UYC6
272844.PAB1313 gi|14521780|ref|NP_127256.1|

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