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Domain assignment for 1ms8_B from Protein Data Bank

Domain architecture


Domain assignment details

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Strong hits

Sequence:  1ms8_B
Domain Number 1 Region: 15-413
Classification Level Classification E-value
Superfamily Sialidases 6.93e-114
Family Sialidases (neuraminidases) 0.00000000000135
Further Details:      
 
Domain Number 2 Region: 423-638
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.38e-71
Family Trypanosoma sialidase, C-terminal domain 0.00000000165
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 1ms8_B
Sequence length 648
Comment mol:protein length:648 trans-sialidase
Sequence
mggshhhhhhgmaslapgssrvelfkrqsskvpfekdgkvtervvhsfrlpalvnvdgvm
vaiadaryetsfdnslidtvakysvddgetwetqiaiknsrassvsrvvdptvivkgnkl
yvlvgsynssrsywtshgdardwdillavgevtkstaggkitasikwgspvslkeffpae
megmhtnqflggagvaivasngnlvypvqvtnkkkqvfskifysedegktwkfgkgrsaf
gcsepvalewegkliintrvdyrrrlvyessdmgntwleavgtlsrvwgpspksnqpgsq
ssftavtiegmrvmlfthplnfkgrwlrdrlnlwltdnqriynvgqvsigdensayssvl
ykddklyclheinsnevyslvfarlvgelriiksvlqswknwdshlssictpadpaasss
ergcgpavttvglvgflshsatktewedayrcvnastanaervpnglkfagvgggalwpv
sqqgqnqryhfanhaftlvasvtihevpkgaspllgasldssggkkllglsydkrhqwqp
iygstpvtptgswemgkryhvvltmankigsvyidgeplegsgqtvvpdertpdishfyv
ggykrsgmptdsrvtvnnvllynrqlnaeeirtlflsqdligteahmd
Download sequence
Identical sequences 2ah2A 1mr5_A 1ms0_A 1ms0_B 1ms1_A 1ms1_B 1ms3_A 1ms3_B 1ms4_A 1ms4_B 1ms8_A 1ms8_B 1ms9_A 1ms9_B 2ah2_A 3b69_A 3opz_A 3opz_B 3opz_C

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