SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 2r93_H from Protein Data Bank

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  2r93_H
Domain Number 1 Region: 1-146
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 2.11e-78
Family RNA polymerase subunit RBP8 0.00000179
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 2r93_H
Sequence length 146
Comment mol:protein length:146 DNA-directed RNA polymerases I, II, and III subunit RPABC3
Sequence
MSNTLFDDIFQVSEVDPGRYNKVCRIEAASTTQDQCKLTLDINVELFPVAAQDSLTVTIA
SSLNLEDTPANDSSATRSWRPPQAGDRSLADDYDYVMYGTAYKFEEVSKDLIAVYYSFGG
LLMRLEGNYRNLNNLKQENAYLLIRR
Download sequence
Identical sequences A0A0L8VH36 A0A250WAG9 A6ZP66 B3LJP7 C7GWF9 C8ZGX8 E7KI92 E7KUQ2 E7M0K4 E7NMS0 E7Q9B6 E7QKW5 G2WN95 H0GNU0 N1NVW0 P20436
NP_014867.1.97178 YOR224C YOR224C YOR224C YOR224C YOR224C YOR224C YOR224C YOR224C YOR224C 1twfH YOR224C YOR224C YOR224C SCRT_01611 YOR224C YOR224C YOR224C YOR224C YOR224C YOR224C YOR224C YOR224C 4932.YOR224C YOR224C YOR224C YOR224C tr|A6ZP66|A6ZP66_YEAS7 YOR224C YOR224C YOR224c___KOG3400 YOR224C 000133931|e3fkiH1|2.1.1.49|H:1-146 000148901|e4a93H1|2.1.1.49|H:1-146 000364976|e3gtgH1|2.1.1.49|H:1-146 000364994|e3gtjH1|2.1.1.49|H:1-146 000365021|e3gtkH1|2.1.1.49|H:1-146 000368678|e3hoxH1|2.1.1.49|H:1-146 000368720|e3hozH1|2.1.1.49|H:1-146 000372210|e3i4mH1|2.1.1.49|H:1-146 000372231|e3i4nH1|2.1.1.49|H:1-146 001681185|e5c3eH1|2.1.1.49|H:1-146 001681216|e5c44H1|2.1.1.49|H:1-146 001681246|e5c4aH1|2.1.1.49|H:1-146 001681307|e5c4xH1|2.1.1.49|H:1-146 001715094|e5fj8H1|2.1.1.49|H:1-146 001715119|e5fj9H1|2.1.1.49|H:1-146 001715141|e5fjaH1|2.1.1.49|H:1-146 cath|current|1i3qH00/2-146 cath|current|1i50H00/2-146 cath|current|1i6hH00/2-146 cath|current|1k83H00/2-146 cath|current|1r9rH00/2-146 cath|current|1r9tH00/2-146 cath|current|1sfoH00/2-146 cath|current|1twaH00/2-146 cath|current|1twcH00/2-146 cath|current|1twfH00/2-146 cath|current|1twgH00/2-146 cath|current|1twhH00/2-146 cath|current|1wcmH00/2-146 cath|current|1y1vH00/2-146 cath|current|1y1wH00/2-146 cath|current|2b63H00/2-146 cath|current|2e2hH00/2-146 cath|current|2e2iH00/1-146 cath|current|2e2jH00/2-146 cath|current|2ja5H00/2-146 cath|current|2ja6H00/2-146 cath|current|2ja7H00/2-146 cath|current|2ja7T00/2-146 cath|current|2ja8H00/2-146 cath|current|2nvqH00/2-146 cath|current|2nvsH00/2-146 cath|current|2nvtH00/2-146 cath|current|2nvxH00/1-146 cath|current|2nvyH00/2-146 cath|current|2r7zH00/2-146 cath|current|2r92H00/2-146 cath|current|2r93H00/2-146 cath|current|2vumH00/2-146 cath|current|2yu9H00/2-146 cath|current|3cqzH00/2-146 cath|current|3fkiH00/1-146 cath|current|3gtgH00/1-146 cath|current|3gtjH00/1-146 cath|current|3gtkH00/1-146 cath|current|3gtlH00/2-146 cath|current|3gtmH00/2-146 cath|current|3gtoH00/2-146 cath|current|3gtpH00/2-146 cath|current|3gtqH00/2-146 cath|current|3h3vI00/2-146 cath|current|3houH00/2-146 cath|current|3houT00/2-146 cath|current|3hovH00/2-146 cath|current|3howH00/2-146 cath|current|3hoxH00/1-146 cath|current|3hoyH00/2-146 cath|current|3hozH00/1-146 cath|current|3i4mH00/1-146 cath|current|3i4nH00/1-146 cath|current|3k7aH00/2-146 cath|current|3m3yH00/2-146 cath|current|3m4oH00/2-146 cath|current|3po2H00/2-146 cath|current|3po3H00/2-146 cath|current|3rzdH00/2-146 cath|current|3rzoH00/2-146 cath|current|3s14H00/2-146 cath|current|3s15H00/2-146 cath|current|3s16H00/2-146 cath|current|3s17H00/2-146 cath|current|3s1mH00/2-146 cath|current|3s1nH00/2-146 cath|current|3s1qH00/2-146 cath|current|3s1rH00/2-146 cath|current|3s2dH00/2-146 cath|current|3s2hH00/2-146 cath|current|4a3bH00/2-146 cath|current|4a3cH00/2-146 cath|current|4a3dH00/2-146 cath|current|4a3eH00/2-146 cath|current|4a3fH00/2-146 cath|current|4a3gH00/2-146 cath|current|4a3iH00/2-146 cath|current|4a3jH00/2-146 cath|current|4a3kH00/2-146 cath|current|4a3lH00/2-146 cath|current|4a3mH00/2-146 cath|current|4a93H00/2-146 cath|current|4bbrH00/2-146 cath|current|4bbsH00/2-146 cath|current|4bxxH00/2-146 cath|current|4by1H00/2-146 cath|current|4c2mH00/3-146 cath|current|4c2mW00/3-146 cath|current|4c3hH00/3-146 cath|current|4c3iH00/3-146 cath|current|4c3jH00/3-146 d1a1da_ 1a1d_A 1i3q_H 1i50_H 1i6h_H 1k83_H 1nik_H 1nt9_H 1pqv_H 1r5u_H 1r9s_H 1r9t_H 1sfo_H 1twa_H 1twc_H 1twf_H 1twg_H 1twh_H 1wcm_H 1y1v_H 1y1w_H 1y1y_H 1y77_H 2b63_H 2b8k_H 2e2h_H 2e2i_H 2e2j_H 2ja5_H 2ja6_H 2ja7_H 2ja7_T 2ja8_H 2nvq_H 2nvt_H 2nvx_H 2nvy_H 2nvz_H 2r7z_H 2r92_H 2r93_H 2vum_H 2yu9_H 3cqz_H 3fki_H 3gtg_H 3gtj_H 3gtk_H 3gtl_H 3gtm_H 3gto_H 3gtp_H 3gtq_H 3h3v_I 3hou_H 3hou_T 3hov_H 3how_H 3hox_H 3hoy_H 3hoz_H 3i4m_H 3i4n_H 3j0k_H 3j1n_H 3k1f_H 3k7a_H 3m3y_H 3m4o_H 3po2_H 3po3_H 3qt1_H 3rzd_H 3rzo_H 3s14_H 3s15_H 3s16_H 3s17_H 3s1m_H 3s1n_H 3s1q_H 3s1r_H 3s2d_H 3s2h_H 4a3b_H 4a3c_H 4a3d_H 4a3e_H 4a3f_H 4a3g_H 4a3i_H 4a3j_H 4a3k_H 4a3l_H 4a3m_H 4a93_H 4bbr_H 4bbs_H 4bxx_H 4bxz_H 4by1_H 4c2m_H 4c2m_W 4c3h_H 4c3i_H 4c3j_H 4v1m_H 4v1n_H 4v1o_H 4x67_H 4x6a_H 4y52_H 4y7n_H 4ym7_AH 4ym7_BH 4ym7_CH 4ym7_DH 4ym7_EH 4ym7_FH 5c3e_H 5c44_H 5c4a_H 5c4j_H 5c4x_H 5fj8_H 5fj9_H 5fja_H 5fmf_H 5fyw_H 5fz5_H 5g5l_H 5lmx_H 5m3f_H 5m3m_H 5m5w_H 5m5x_H 5m5y_H 5m64_H 5n5y_H 5n5z_H 5n60_H 5n61_H 5oa1_H 5oqj_H 5oqm_H 5ot2_H 5sva_H 5u5q_H 5vvr_H 5vvs_H 5w4u_H 5w51_H 5w5y_H 5w64_H 5w65_H 5w66_H 6blo_H 6blp_H 6bm2_H 6bm4_H 6bqf_H 6cnb_H 6cnc_H 6cnd_H 6cnf_H 6eu0_H 6eu1_H 6eu2_H 6eu3_H 6f40_H 6f41_H 6f42_H 6f44_H 6h67_H 6h68_H

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]