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Domain assignment for 3j9y_w from Protein Data Bank

Domain architecture


Domain assignment details

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Strong hits

Sequence:  3j9y_w
Domain Number 1 Region: 2-236
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 2e-70
Family G proteins 0.0003
Further Details:      
 
Domain Number 2 Region: 416-532
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 2.39e-21
Family Translational machinery components 0.0014
Further Details:      
 
Domain Number 3 Region: 342-418
Classification Level Classification E-value
Superfamily EF-G C-terminal domain-like 3.12e-16
Family EF-G/eEF-2 domains III and V 0.0014
Further Details:      
 
Domain Number 4 Region: 224-317
Classification Level Classification E-value
Superfamily Translation proteins 0.0000000000000141
Family Elongation factors 0.026
Further Details:      
 
Domain Number 5 Region: 535-619
Classification Level Classification E-value
Superfamily EF-G C-terminal domain-like 0.0000000000000332
Family EF-G/eEF-2 domains III and V 0.019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 3j9y_w
Sequence length 639
Comment mol:protein length:639 Tetracycline resistance protein TetM
Sequence
MKIINIGVLAHVDAGKTTLTESLLYNSGAITELGSVDKGTTRTDNTLLERQRGITIQTGI
TSFQWENTKVNIIDTPGHMDFLAEVYRSLSVLDGAILLISAKDGVQAQTRILFHALRKMG
IPTIFFINKIDQNGIDLSTVYQDIKEKLSAEIVIKQKVELYPNVCVTNFTESEQWDTVIE
GNDDLLEKYMSGKSLEALELEQEESIRFQNCSLFPLYHGSAKSNIGIDNLIEVITNKFYS
STHRGPSELCGNVFKIEYTKKRQRLAYIRLYSGVLHLRDSVRVSEKEKIKVTEMYTSING
ELCKIDRAYSGEIVILQNEFLKLNSVLGDTKLLPQRKKIENPHPLLQTTVEPSKPEQREM
LLDALLEISDSDPLLRYYVDSTTHEIILSFLGKVQMEVISALLQEKYHVEIEITEPTVIY
MERPLKNAEYTIHIEVPPNPFWASIGLSVSPLPLGSGMQYESSVSLGYLNQSFQNAVMEG
IRYGCEQGLYGWNVTDCKICFKYGLYYSPVSTPADFRMLAPIVLEQVLKKAGTELLEPYL
SFKIYAPQEYLSRAYNDAPKYCANIVDTQLKNNEVILSGEIPARCIQEYRSDLTFFTNGR
SVCLTELKGYHVTTGEPVCQPRRPNSRIDKVRYMFNKIT
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Identical sequences P21598
3j9y_w 5kcs_1w

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