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Domain assignment for 4b3m_Q from Protein Data Bank

Domain architecture


Domain assignment details

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Strong hits

Sequence:  4b3m_Q
Domain Number 1 Region: 2-100
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 3.75e-33
Family Cold shock DNA-binding domain-like 0.00000253
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 4b3m_Q
Sequence length 104
Comment mol:protein length:104 30S RIBOSOMAL PROTEIN S17
Sequence
pkkvltgvvvsdkmqktvtvlverqfphplygkvikrskkylahdpeekyklgdvveiie
srpiskrkrfrvlrlvesgrmdlvekylirrqnyqslskrggka
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Identical sequences 1j5eQ 001552408|e2hhhQ1|2.1.1.370|Q:2-105 001552418|e1hr0Q1|2.1.1.370|Q:2-105 001552439|e1ibkQ1|2.1.1.370|Q:2-105 001552472|e1jgoT1|2.1.1.370|T:2-105 001552475|e1jgpT1|2.1.1.370|T:2-105 001552478|e1jgqT1|2.1.1.370|T:2-105 001552634|e1ml5T1|2.1.1.370|T:2-105 001552640|e1n33Q1|2.1.1.370|Q:1-104 001552750|e3t1yQ1|2.1.1.370|Q:2-105 001552912|e4v42AT1|2.1.1.370|AT:2-105 001552947|e4v4jr1|2.1.1.370|r:2-105 001552968|e4v4tAQ1|2.1.1.370|AQ:2-105 001553888|e1xmqQ1|2.1.1.370|Q:2-105 001555280|e4aqyQ1|2.1.1.370|Q:1-104 001555287|e4b3mQ1|2.1.1.370|Q:1-104 001555288|e4b3rQ1|2.1.1.370|Q:1-104 001555289|e4b3sQ1|2.1.1.370|Q:1-104 001555290|e4b3tQ1|2.1.1.370|Q:1-104 001555325|e2e5lQ1|2.1.1.370|Q:1-104 001555339|e2f4vQ1|2.1.1.370|Q:2-105 001555346|e1fjgQ1|2.1.1.370|Q:2-105 001555357|e4gkjQ1|2.1.1.370|Q:1-104 001555358|e4gkkQ1|2.1.1.370|Q:1-104 001555367|e1hnwQ1|2.1.1.370|Q:2-105 001555368|e1hnxQ1|2.1.1.370|Q:2-105 001555369|e1hnzQ1|2.1.1.370|Q:2-105 001555377|e1iblQ1|2.1.1.370|Q:2-105 001555378|e1ibmQ1|2.1.1.370|Q:2-105 001555391|e1j5eQ1|2.1.1.370|Q:1-104 001555442|e1n32Q1|2.1.1.370|Q:1-104 001555443|e1n34Q1|2.1.1.370|Q:1-104 001555444|e1n36Q1|2.1.1.370|Q:1-104 001555467|e3otoQ1|2.1.1.370|Q:2-105 001555555|e3t1hQ1|2.1.1.370|Q:2-105 001555639|e2uxbQ1|2.1.1.370|Q:2-105 001555640|e2uxcQ1|2.1.1.370|Q:2-105 001555641|e2uxdQ1|2.1.1.370|Q:2-105 001555644|e4v49AQ1|2.1.1.370|AQ:1-104 001555645|e4v4aAQ1|2.1.1.370|AQ:1-104 001555652|e4v4gAQ1|2.1.1.370|AQ:1-104 001555653|e4v4gCQ1|2.1.1.370|CQ:1-104 001555654|e4v4gEQ1|2.1.1.370|EQ:1-104 001555655|e4v4gGQ1|2.1.1.370|GQ:1-104 001555656|e4v4gIQ1|2.1.1.370|IQ:1-104 001555657|e4v4ir1|2.1.1.370|r:2-105 001555659|e4v4pBT1|2.1.1.370|BT:2-105 001555660|e4v4rAQ1|2.1.1.370|AQ:2-105 001555661|e4v4sAQ1|2.1.1.370|AQ:2-105 001555662|e4v4xAT1|2.1.1.370|AT:2-105 001555663|e4v4yAT1|2.1.1.370|AT:2-105 001555664|e4v4zAT1|2.1.1.370|AT:2-105 001555686|e2vqeQ1|2.1.1.370|Q:2-105 001555687|e2vqfQ1|2.1.1.370|Q:2-105 001555712|e1xmoQ1|2.1.1.370|Q:2-105 001555713|e1xnqQ1|2.1.1.370|Q:2-105 001555714|e1xnrQ1|2.1.1.370|Q:2-105 001694759|e5aa0BU1|2.1.1.370|BU:1-104 001697120|e5a9zBU1|2.1.1.370|BU:1-104 001832027|e5imqU1|2.1.1.370|U:2-105 001832084|e5imrU1|2.1.1.370|U:2-105 cath|current|1j5eQ00/2-105 cath|current|1n32Q00/2-105 cath|current|1n33Q00/2-105 cath|current|1n34Q00/2-105 cath|current|1n36Q00/2-105 cath|current|2e5lQ00/2-105 cath|current|2zm6Q00/2-101 cath|current|4aqyQ00/2-105 cath|current|4b3mQ00/1-104 cath|current|4b3rQ00/1-104 cath|current|4b3sQ00/1-104 cath|current|4b3tQ00/1-104 cath|current|4gkjQ00/2-105 cath|current|4gkkQ00/2-105 d1fjgq_ d1hnwq_ d1hnxq_ d1hnzq_ d1hr0q_ d1j5eq_ d1n32q_ d1n33q_ d1n34q_ d1n36q_ d1xmoq_ d1xmqq_ d1xnqq_ d1xnrq_ d1yl4t1 d2b64q1 d2b9mq1 d2b9oq1 d2e5lq1 d2f4vq1 d2hgit1 d2hgpt1 d2hgrt1 d2hhhq1 d2ow8r1 d2qnhr1 d2uxbq1 d2uxcq1 d2uxdq1 d2vqeq1 d2vqfq1 1j5e_Q 1n32_Q 1n33_Q 1n34_Q 1n36_Q 2e5l_Q 2zm6_Q 4aqy_Q 4b3m_Q 4b3r_Q 4b3s_Q 4b3t_Q 4gkj_Q 4gkk_Q 4v49_AQ 4v4a_AQ 4v4g_AQ 4v4g_CQ 4v4g_EQ 4v4g_GQ 4v4g_IQ 5a9z_BU 5aa0_BU 5zlu_A 6car_Q

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