SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 4dr6_L from Protein Data Bank

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  4dr6_L
Domain Number 1 Region: 5-127
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 4.86e-52
Family Cold shock DNA-binding domain-like 0.000000488
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 4dr6_L
Sequence length 135
Comment mol:protein length:135 30S ribosomal protein S12
Sequence
mvalptinqlvrkgrekvrkkskvpalkgapfrrgvctvvrtvtpkkpnsalrkvakvrl
tsgyevtayipgeghnlqehsvvlirggrvkxlpgvryhivrgvydaagvkdrkksrsky
gtkkpkeaaktaakk
Download sequence
Identical sequences 4dr1_L 4dr2_L 4dr3_L 4dr4_L 4dr5_L 4dr6_L 4dr7_L 4duy_L 4duz_L 4dv0_L 4dv1_L 4dv2_L 4dv3_L 4dv4_L 4dv5_L 4dv6_L 4dv7_L 4ji5_L 4lf4_L 4lf5_L 4lf6_L 4lf7_L 4lf8_L 4lf9_L 4lfa_L 4lfb_L 4lfc_L 4nxm_L 4nxn_L 5br8_L 5v8i_1l 5v8i_2l cath|current|4dr1L00/5-128 cath|current|4dr2L00/5-129 cath|current|4dr3L00/5-128 cath|current|4dr4L00/5-129 cath|current|4dr5L00/5-129 cath|current|4dr6L00/5-129 cath|current|4dr7L00/5-129 cath|current|4duyL00/5-128 cath|current|4duzL00/5-128 cath|current|4dv0L00/5-128 cath|current|4dv1L00/5-128 cath|current|4dv2L00/5-128 cath|current|4dv3L00/5-128 cath|current|4dv4L00/5-128 cath|current|4dv5L00/5-128 cath|current|4dv6L00/5-128 cath|current|4dv7L00/5-128 cath|current|4ji5L00/5-128 cath|current|4lf4L00/5-129 cath|current|4lf5L00/5-129 cath|current|4lf6L00/5-129 cath|current|4lf7L00/5-129 cath|current|4lf8L00/5-129 cath|current|4lf9L00/5-129 cath|current|4lfaL00/5-129 cath|current|4lfbL00/5-129 cath|current|4lfcL00/5-129 cath|current|4nxmL00/5-128 cath|current|4nxnL00/5-128

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]