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Domain assignment for 4v5s_AQ from Protein Data Bank

Domain architecture


Domain assignment details

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Strong hits

Sequence:  4v5s_AQ
Domain Number 1 Region: 3-101
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 2.72e-33
Family Cold shock DNA-binding domain-like 0.00000264
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 4v5s_AQ
Sequence length 105
Comment mol:protein length:105 30S RIBOSOMAL PROTEIN S17
Sequence
MPKKVLTGVVVSDKMQKTVTVLVERQFPHPLYGKVIKRSKKYLAHDPEEKYKLGDVVEII
ESRPISKRKRFRVLRLVESGRMDLVEKYLIRRQNYESLSKRGGKA
Download sequence
Identical sequences P0DOY7
300852.TTHA1683 1vvj_QQ 1vvj_XQ 1vy4_AQ 1vy4_CQ 1vy5_AQ 1vy5_CQ 1vy6_AQ 1vy6_CQ 1vy7_AQ 1vy7_CQ 2uu9_Q 2uua_Q 2uub_Q 2uuc_Q 4ji0_Q 4ji1_Q 4ji2_Q 4ji3_Q 4ji4_Q 4ji5_Q 4ji6_Q 4ji7_Q 4ji8_Q 4l47_QQ 4l47_XQ 4l71_QQ 4l71_XQ 4lel_QQ 4lel_XQ 4lf4_Q 4lf5_Q 4lf6_Q 4lf7_Q 4lf8_Q 4lf9_Q 4lfa_Q 4lfb_Q 4lfc_Q 4lfz_QQ 4lfz_XQ 4lnt_QQ 4lnt_XQ 4lsk_QQ 4lsk_XQ 4lt8_QQ 4lt8_XQ 4nxm_Q 4nxn_Q 4p6f_QQ 4p6f_XQ 4p70_QQ 4p70_XQ 4tua_QQ 4tua_XQ 4tub_QQ 4tub_XQ 4tuc_QQ 4tuc_XQ 4tud_QQ 4tud_XQ 4tue_QQ 4tue_XQ 4v51_AQ 4v51_CQ 4v5a_AQ 4v5a_CQ 4v5c_AQ 4v5c_CQ 4v5d_AQ 4v5d_CQ 4v5e_AQ 4v5e_CQ 4v5f_AQ 4v5f_CQ 4v5g_AQ 4v5g_CQ 4v5j_AQ 4v5j_CQ 4v5k_AQ 4v5k_CQ 4v5l_AQ 4v5m_AQ 4v5n_AQ 4v5p_AQ 4v5p_CQ 4v5q_AQ 4v5q_CQ 4v5r_AQ 4v5r_CQ 4v5s_AQ 4v5s_CQ 4v6a_AQ 4v6a_CQ 4v6f_BT 4v6f_CT 4v6g_AT 4v6g_CT 4v7j_Aq 4v7j_Bq 4v7k_Aq 4v7k_Bq 4v7l_AQ 4v7l_CQ 4v7m_AQ 4v7m_CQ 4v7w_AQ 4v7w_CQ 4v7x_AQ 4v7x_CQ 4v7y_AQ 4v7y_CQ 4v7z_AQ 4v7z_CQ 4v87_BT 4v87_CT 4v8a_CQ 4v8a_DQ 4v8b_AT 4v8b_CT 4v8c_CT 4v8c_DT 4v8d_AT 4v8d_CT 4v8e_BT 4v8e_DT 4v8f_BT 4v8f_CT 4v8g_AQ 4v8g_CQ 4v8h_AQ 4v8h_CQ 4v8i_AQ 4v8i_CQ 4v8j_AQ 4v8j_CQ 4v8n_AQ 4v8n_CQ 4v8o_AQ 4v8q_BQ 4v8u_AQ 4v8u_CQ 4v8x_AQ 4v8x_CQ 4v90_AQ 4v95_AQ 4v95_CQ 4v97_AQ 4v97_CQ 4v9a_AT 4v9a_CT 4v9b_AT 4v9b_CT 4v9r_AQ 4v9r_CQ 4v9s_AQ 4v9s_CQ 4w2e_q 4w2f_AQ 4w2f_CQ 4w2g_AQ 4w2g_CQ 4w2h_AQ 4w2h_CQ 4w2i_AQ 4w2i_CQ 4w4g_QQ 4w4g_XQ 4wpo_BQ 4wpo_DQ 4wq1_8A 4wq1_8I 4wqf_BQ 4wqf_DQ 4wqr_8A 4wqr_8I 4wqu_BQ 4wqu_DQ 4wqy_BQ 4wqy_DQ 4wr6_8A 4wr6_8I 4wra_8A 4wra_8I 4wro_8I 4wsd_8A 4wsd_8I 4wsm_8A 4wsm_8I 4wt1_8A 4wt1_8I 4wu1_8A 4wu1_8I 4wzd_8A 4wzd_8I 4wzo_8A 4wzo_8I 4y4o_1q 4y4o_2q 4y4p_1q 4y4p_2q 4ypb_QQ 4ypb_XQ 4yy3_Q 4yzv_QQ 4yzv_XQ 4z3s_1q 4z3s_2q 4z8c_1q 4z8c_2q 4zsn_QQ 4zsn_XQ 5czp_QQ 5czp_XQ 5dfe_QQ 5dfe_XQ 5dox_1q 5dox_2q 5doy_1q 5doy_2q 5e7k_8A 5e7k_8I 5e81_8A 5e81_8I 5el4_8A 5el4_8I 5el5_8A 5el5_8I 5el6_8A 5el6_8I 5el7_8A 5el7_8I 5hau_1q 5hau_2q 5hcp_1q 5hcp_2q 5hcq_1q 5hcq_2q 5hcr_1q 5hcr_2q 5hd1_1q 5hd1_2q 5ib7_8A 5ib7_8I 5ib8_8A 5ib8_8I 5ibb_8A 5ibb_8I 5j30_QQ 5j30_XQ 5j3c_QQ 5j3c_XQ 5j4b_1q 5j4b_2q 5j4c_1q 5j4c_2q 5j8b_q 5lmn_Q 5lmo_Q 5lmp_Q 5lmq_Q 5lmr_Q 5lms_Q 5lmt_Q 5lmu_Q 5lmv_Q 5ndj_8A 5ndj_8I 5ndk_8A 5ndk_8I 5vp2_1q 5vp2_2q 5vpo_QQ 5vpo_XQ 5vpp_QQ 5vpp_XQ 5w4k_1q 5w4k_2q 5wis_1q 5wis_2q 5wit_1q 5wit_2q 6c5l_AQ 6c5l_CQ 6cae_1q 6cae_2q 6cfj_1q 6cfj_2q 6cfk_1q 6cfk_2q 6cfl_1q 6cfl_2q 6gsj_8A 6gsj_8I 6gsk_8A 6gsk_8I 6gsl_8A 6gsl_8I cath|current|1vvlQ00/2-101 cath|current|1vvnQ00/2-101 cath|current|1vvpQ00/2-101 cath|current|1vvrQ00/2-101 cath|current|1vvtQ00/2-101 cath|current|1vvvQ00/2-101 cath|current|1vvxQ00/2-101 cath|current|1vvzQ00/2-101 cath|current|1vx8Q00/2-101 cath|current|1vxiQ00/2-101 cath|current|1vxkQ00/2-101 cath|current|1vxmQ00/2-101 cath|current|1vxpQ00/2-101 cath|current|1vxsQ00/2-101 cath|current|1vy0Q00/2-101 cath|current|1vy2Q00/2-101 cath|current|2j00Q00/2-101 cath|current|2j02Q00/2-101 cath|current|2jl5Q00/2-101 cath|current|2jl7Q00/2-101 cath|current|2uu9Q00/2-105 cath|current|2uuaQ00/2-105 cath|current|2uubQ00/2-105 cath|current|2uucQ00/2-105 cath|current|2v46Q00/2-101 cath|current|2v48Q00/2-101 cath|current|2wdgQ00/2-101 cath|current|2wdhQ00/2-101 cath|current|2wdkQ00/2-101 cath|current|2wdmQ00/2-101 cath|current|2wh1Q00/2-101 cath|current|2wh3Q00/2-101 cath|current|2wriQ00/2-101 cath|current|2wrkQ00/2-101 cath|current|2wrnQ00/2-101 cath|current|2wrqQ00/2-101 cath|current|2x9rQ00/2-101 cath|current|2x9tQ00/2-101 cath|current|2xfzQ00/2-101 cath|current|2xg1Q00/2-101 cath|current|2xqdQ00/2-100 cath|current|2y0uQ00/2-100 cath|current|2y0wQ00/2-100 cath|current|2y0yQ00/2-100 cath|current|2y10Q00/2-100 cath|current|2y12Q00/2-100 cath|current|2y14Q00/2-100 cath|current|2y16Q00/2-100 cath|current|2y18Q00/2-100 cath|current|3huwQ00/2-101 cath|current|3huyQ00/2-101 cath|current|3i8gT00/2-101 cath|current|3i8hT00/2-101 cath|current|3i9bT00/2-101 cath|current|3i9dT00/2-101 cath|current|3kiqq00/2-100 cath|current|3kisq00/2-100 cath|current|3kiuq00/2-100 cath|current|3kixq00/2-100 cath|current|3knhQ00/2-101 cath|current|3knjQ00/2-101 cath|current|3knlQ00/2-101 cath|current|3knnQ00/2-101 cath|current|3ogeQ00/2-101 cath|current|3ogyQ00/2-101 cath|current|3ohcQ00/2-101 cath|current|3ohdQ00/2-101 cath|current|3ohyQ00/2-101 cath|current|3oi0Q00/2-101 cath|current|3oi2Q00/2-101 cath|current|3oi4Q00/2-101 cath|current|3tvfT00/2-101 cath|current|3tvgT00/2-101 cath|current|3uxsQ00/2-100 cath|current|3uxtQ00/2-100 cath|current|3uydT00/2-101 cath|current|3uyfT00/2-101 cath|current|3uz3T00/2-101 cath|current|3uz4T00/2-101 cath|current|3uz6T00/2-101 cath|current|3uz7T00/2-101 cath|current|3uzgT00/2-101 cath|current|3uziT00/2-101 cath|current|3uzlT00/2-101 cath|current|3uzmT00/2-101 cath|current|3v22Q00/2-100 cath|current|3v24Q00/2-100 cath|current|3v26Q00/2-100 cath|current|3v28Q00/2-100 cath|current|3v2cQ00/2-100 cath|current|3v2eQ00/2-100 cath|current|3v6uQ00/2-101 cath|current|3v6vQ00/2-101 cath|current|3zn7Q00/2-101 cath|current|3zndQ00/2-101 cath|current|3zvoQ00/2-101 cath|current|4abrQ00/2-101 cath|current|4b8fQ00/2-101 cath|current|4b8hQ00/2-101 cath|current|4btcQ00/2-101 cath|current|4bybQ00/2-101 cath|current|4bydQ00/2-101 cath|current|4cr1Q00/2-101 cath|current|4dh9Q00/2-100 cath|current|4dhbQ00/2-100 cath|current|4ej9Q00/2-101 cath|current|4ejaQ00/2-101 cath|current|4g5kT00/2-101 cath|current|4g5mT00/2-101 cath|current|4g5tT00/2-101 cath|current|4g5vT00/2-101 cath|current|4ji0Q00/2-100 cath|current|4ji1Q00/2-105 cath|current|4ji2Q00/2-100 cath|current|4ji3Q00/2-100 cath|current|4ji4Q00/2-100 cath|current|4ji5Q00/2-100 cath|current|4ji6Q00/2-100 cath|current|4ji7Q00/2-100 cath|current|4ji8Q00/2-100 cath|current|4kwzQ00/2-101 cath|current|4kx1Q00/2-101 cath|current|4lf4Q00/2-105 cath|current|4lf5Q00/2-100 cath|current|4lf6Q00/2-105 cath|current|4lf7Q00/2-102 cath|current|4lf8Q00/2-102 cath|current|4lf9Q00/2-105 cath|current|4lfaQ00/2-105 cath|current|4lfbQ00/2-105 cath|current|4lfcQ00/2-105 cath|current|4nvuQ00/2-100 cath|current|4nvwQ00/2-100 cath|current|4nvyQ00/2-100 cath|current|4nw0Q00/2-100 cath|current|4nxmQ00/2-100 cath|current|4nxnQ00/2-100 cath|current|4qcmQ00/2-100 cath|current|4qcoQ00/2-100 cath|current|4qcqQ00/2-100 cath|current|4qcsQ00/2-100 cath|current|4qcuQ00/2-100 cath|current|4qcwQ00/2-100 cath|current|4qcyQ00/2-100 cath|current|4qd0Q00/2-100 cath|current|4qjtq00/2-100 cath|current|4rb5Q00/2-100 cath|current|4rb7Q00/2-100 cath|current|4rb9Q00/2-100 cath|current|4rbbQ00/2-100 cath|current|4rbdQ00/2-100 cath|current|4rbfQ00/2-100 cath|current|4rbhQ00/2-100 cath|current|4rbjQ00/2-100 cath|current|4w2aR00/2-101 cath|current|4w2cR00/2-101 YP_144949.1.19876 gi|55981652|ref|YP_144949.1| 2uubQ

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