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Domain assignment for 4v9b_BD from Protein Data Bank

Domain architecture


Domain assignment details

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Strong hits

Sequence:  4v9b_BD
Domain Number 1 Region: 127-272
Classification Level Classification E-value
Superfamily Translation proteins SH3-like domain 1.06e-60
Family C-terminal domain of ribosomal protein L2 0.0000000486
Further Details:      
 
Domain Number 2 Region: 2-125
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 2.07e-54
Family Cold shock DNA-binding domain-like 0.000000237
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 4v9b_BD
Sequence length 276
Comment mol:protein length:276 50S ribosomal protein L2
Sequence
MAVKKFKPYTPSRRFMTVADFSEITKTEPEKSLVKPLKKTGGRNNQGRITVRFRGGGHKR
LYRIIDFKRWDKVGIPAKVAAIEYDPNRSARIALLHYVDGEKRYIIAPDGLQVGQQVVAG
PDAPIQVGNALPLRFIPVGTVVHAVELEPKKGAKLARAAGTSAQIQGREGDYVILRLPSG
ELRKVHGECYATVGAVGNADHKNIVLGKAGRSRWLGRRPHVRGAAMNPVDHPHGGGEGRA
PRGRPPASPWGWQTKGLKTRKRRKPSSRFIIARRKK
Download sequence
Identical sequences P60405 Q72I07
1vvj_RD 1vvj_YD 1vy4_BD 1vy4_DD 1vy5_BD 1vy5_DD 1vy6_BD 1vy6_DD 1vy7_BD 1vy7_DD 4l47_RD 4l47_YD 4l71_RD 4l71_YD 4lel_RD 4lel_YD 4lfz_RD 4lfz_YD 4lnt_RD 4lnt_YD 4lsk_RD 4lsk_YD 4lt8_RD 4lt8_YD 4p6f_RD 4p6f_YD 4p70_RD 4p70_YD 4tua_RD 4tua_YD 4tub_RD 4tub_YD 4tuc_RD 4tuc_YD 4tud_RD 4tud_YD 4tue_RD 4tue_YD 4v4i_B 4v4j_B 4v4x_BD 4v4y_BD 4v4z_BD 4v51_BD 4v51_DD 4v5a_BD 4v5a_DD 4v5c_BD 4v5c_DD 4v5d_BD 4v5d_DD 4v5e_BD 4v5e_DD 4v5f_BD 4v5f_DD 4v5g_BD 4v5g_DD 4v5j_BD 4v5j_DD 4v5k_BD 4v5k_DD 4v5l_BD 4v5m_BD 4v5n_BD 4v5p_BD 4v5p_DD 4v5q_BD 4v5q_DD 4v5r_BD 4v5r_DD 4v5s_BD 4v5s_DD 4v63_BD 4v63_DD 4v67_BD 4v67_DD 4v6a_BD 4v6a_DD 4v6f_AD 4v6f_DD 4v6g_BD 4v6g_DD 4v7j_AD 4v7j_BD 4v7k_AD 4v7k_BD 4v7l_BD 4v7l_DD 4v7m_BD 4v7m_DD 4v7w_BD 4v7w_DD 4v7x_BD 4v7x_DD 4v7y_BD 4v7y_DD 4v7z_BD 4v7z_DD 4v8a_AD 4v8a_BD 4v8b_BD 4v8b_DD 4v8c_AD 4v8c_BD 4v8d_BD 4v8d_DD 4v8e_AD 4v8e_CD 4v8f_AD 4v8f_DD 4v8g_BD 4v8g_DD 4v8h_BD 4v8h_DD 4v8i_BD 4v8i_DD 4v8j_BD 4v8j_DD 4v8n_BD 4v8n_DD 4v8o_BD 4v8q_AD 4v8u_BD 4v8u_DD 4v8x_BD 4v8x_DD 4v95_BD 4v95_DD 4v97_BD 4v97_DD 4v9a_BD 4v9a_DD 4v9b_BD 4v9b_DD 4v9h_BD 4v9r_BD 4v9r_DD 4v9s_BD 4v9s_DD 4w2e_D 4w2f_BD 4w2f_DD 4w2g_BD 4w2g_DD 4w2h_BD 4w2h_DD 4w2i_BD 4w2i_DD 4w4g_RD 4w4g_YD 4wpo_AD 4wpo_CD 4wq1_19 4wqf_AD 4wqf_CD 4wqr_11 4wqr_19 4wqu_AD 4wqu_CD 4wqy_AD 4wqy_CD 4wr6_11 4wr6_19 4wra_11 4wra_19 4wro_11 4wsd_11 4wsd_19 4wsm_11 4wsm_19 4wt1_11 4wt1_19 4wu1_11 4wu1_19 4wzd_11 4wzd_19 4wzo_11 4wzo_19 4y4o_1D 4y4o_2D 4y4p_1D 4y4p_2D 4ypb_RD 4ypb_YD 4yzv_RD 4yzv_YD 4z3s_1D 4z3s_2D 4z8c_1D 4z8c_2D 4zsn_RD 4zsn_YD 5czp_RD 5czp_YD 5dfe_RD 5dfe_YD 5dox_1D 5dox_2D 5doy_1D 5doy_2D 5e7k_11 5e7k_19 5e81_11 5e81_19 5el4_11 5el4_19 5el5_11 5el5_19 5el6_11 5el6_19 5el7_11 5el7_19 5hau_1D 5hau_2D 5hcp_1D 5hcp_2D 5hcq_1D 5hcq_2D 5hcr_1D 5hcr_2D 5hd1_1D 5hd1_2D 5ib7_11 5ib7_19 5ib8_11 5ib8_19 5ibb_11 5ibb_19 5imq_a 5imr_a 5j30_RD 5j30_YD 5j3c_RD 5j3c_YD 5j4b_1D 5j4b_2D 5j4c_1D 5j4c_2D 5j8b_D 5ndj_11 5ndj_19 5ndk_11 5ndk_19 5v8i_1D 5v8i_2D 5vp2_1D 5vp2_2D 5vpo_RD 5vpo_YD 5vpp_RD 5vpp_YD 5w4k_1D 5w4k_2D 5wis_1D 5wis_2D 5wit_1D 5wit_2D 5zlu_Z 6c5l_BD 6c5l_DD 6cae_1D 6cae_2D 6cfj_1D 6cfj_2D 6cfk_1D 6cfk_2D 6cfl_1D 6cfl_2D 6gsj_11 6gsj_19 6gsk_11 6gsk_19 6gsl_11 6gsl_19 WP_011173712.1.85415 YP_144955.1.19876 262724.TTC1325 300852.TTHA1689 2j01D gi|46199627|ref|YP_005294.1| gi|55981658|ref|YP_144955.1|

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