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Domain assignment for 4wsm_3I from Protein Data Bank

Domain architecture


Domain assignment details

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Strong hits

Sequence:  4wsm_3I
Domain Number 1 Region: 2-124
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 4.49e-53
Family Cold shock DNA-binding domain-like 0.000000446
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 4wsm_3I
Sequence length 132
Comment mol:protein length:132 30S ribosomal protein S12
Sequence
MPTINQLVRKGREKVRKKSKVPALKGAPFRRGVCTVVRTVTPKKPNSALRKVAKVRLTSG
YEVTAYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGVYDAAGVKDRKKSRSKYGTK
KPKEAAKTAAKK
Download sequence
Identical sequences P17293 P61941 Q5SHN3
2f4vL 2ow8m 2qnhm 1vvj_QL 1vvj_XL 1vy4_AL 1vy4_CL 1vy5_AL 1vy5_CL 1vy6_AL 1vy6_CL 1vy7_AL 1vy7_CL 2f4v_L 3t1h_L 3t1y_L 4b3m_L 4b3r_L 4b3s_L 4b3t_L 4l47_QL 4l47_XL 4l71_QL 4l71_XL 4lel_QL 4lel_XL 4lfz_QL 4lfz_XL 4lnt_QL 4lnt_XL 4lsk_QL 4lsk_XL 4lt8_QL 4lt8_XL 4p6f_QL 4p6f_XL 4p70_QL 4p70_XL 4tua_QL 4tua_XL 4tub_QL 4tub_XL 4tuc_QL 4tuc_XL 4tud_QL 4tud_XL 4tue_QL 4tue_XL 4v4i_m 4v4j_m 4v4x_AO 4v4y_AO 4v4z_AO 4v5e_AL 4v5e_CL 4v5f_AL 4v5f_CL 4v5j_AL 4v5j_CL 4v5m_AL 4v5n_AL 4v5q_AL 4v5q_CL 4v6a_AL 4v6a_CL 4v6f_BO 4v6f_CO 4v6g_AO 4v6g_CO 4v7j_Al 4v7j_Bl 4v7k_Al 4v7k_Bl 4v7l_AL 4v7l_CL 4v7m_AL 4v7m_CL 4v87_BO 4v87_CO 4v8a_CL 4v8a_DL 4v8b_AO 4v8b_CO 4v8c_CO 4v8c_DO 4v8d_AO 4v8d_CO 4v8e_BO 4v8e_DO 4v8f_BO 4v8f_CO 4v8g_AL 4v8g_CL 4v8h_AL 4v8h_CL 4v8i_AL 4v8i_CL 4v8j_AL 4v8j_CL 4v8u_AL 4v8u_CL 4v8x_AL 4v8x_CL 4v90_AL 4v95_AL 4v95_CL 4v97_AL 4v97_CL 4v9r_AL 4v9r_CL 4v9s_AL 4v9s_CL 4w2e_l 4w2f_AL 4w2f_CL 4w2g_AL 4w2g_CL 4w2h_AL 4w2h_CL 4w2i_AL 4w2i_CL 4w4g_QL 4w4g_XL 4wpo_BL 4wpo_DL 4wq1_3A 4wq1_3I 4wqf_BL 4wqf_DL 4wqr_3A 4wqr_3I 4wqu_BL 4wqu_DL 4wqy_BL 4wqy_DL 4wr6_3A 4wr6_3I 4wra_3A 4wra_3I 4wro_3I 4wsd_3A 4wsd_3I 4wsm_3A 4wsm_3I 4wt1_3A 4wt1_3I 4wu1_3A 4wu1_3I 4wzd_3A 4wzd_3I 4wzo_3A 4wzo_3I 4ypb_QL 4ypb_XL 4yy3_L 4yzv_QL 4yzv_XL 4z8c_1l 4z8c_2l 4zsn_QL 4zsn_XL 5d8b_IC 5d8b_MA 5e7k_3A 5e7k_3I 5e81_3A 5e81_3I 5el4_3A 5el4_3I 5el5_3A 5el5_3I 5el6_3A 5el6_3I 5el7_3A 5el7_3I 5hau_1l 5hau_2l 5hcp_1l 5hcp_2l 5hcq_1l 5hcq_2l 5hcr_1l 5hcr_2l 5hd1_1l 5hd1_2l 5ib7_3A 5ib7_3I 5ib8_3A 5ib8_3I 5ibb_3A 5ibb_3I 5imq_P 5imr_P 5j8b_l 5lmn_L 5lmo_L 5lmp_L 5lmq_L 5lmr_L 5lms_L 5lmt_L 5lmu_L 5lmv_L 5ndj_3A 5ndj_3I 5ndk_3A 5ndk_3I 5vpo_QL 5vpo_XL 5vpp_QL 5vpp_XL 5zlu_Q 6c5l_AL 6c5l_CL 6gsj_3A 6gsj_3I 6gsk_3A 6gsk_3I 6gsl_3A 6gsl_3I cath|current|1vvlL00/5-129 cath|current|1vvnL00/5-129 cath|current|1vvpL00/5-129 cath|current|1vvrL00/5-129 cath|current|1vvtL00/5-129 cath|current|1vvvL00/5-129 cath|current|1vvxL00/5-129 cath|current|1vvzL00/5-129 cath|current|1vx8L00/5-129 cath|current|1vxiL00/5-129 cath|current|1vxkL00/5-129 cath|current|1vxmL00/5-129 cath|current|1vxpL00/5-129 cath|current|1vxsL00/5-129 cath|current|1vy0L00/5-129 cath|current|1vy2L00/5-129 cath|current|2f4vL00/5-129 cath|current|2i1cm00/5-128 cath|current|2jl5L00/5-130 cath|current|2jl7L00/5-130 cath|current|2ow8m00/4-127 cath|current|2qnhm00/4-127 cath|current|2wh1L00/5-130 cath|current|2wh3L00/5-130 cath|current|2wriL00/5-129 cath|current|2wrkL00/5-129 cath|current|2x9rL00/5-129 cath|current|2x9tL00/5-129 cath|current|2y0yL00/5-128 cath|current|2y12L00/5-128 cath|current|3huwL00/2-126 cath|current|3huyL00/2-126 cath|current|3i8gO00/5-129 cath|current|3i8hO00/5-129 cath|current|3i9bO00/5-129 cath|current|3i9dO00/5-129 cath|current|3kiql00/5-128 cath|current|3kisl00/5-128 cath|current|3kiul00/5-128 cath|current|3kixl00/5-128 cath|current|3knhL00/2-126 cath|current|3knjL00/2-126 cath|current|3knlL00/2-126 cath|current|3knnL00/2-126 cath|current|3t1hL00/5-128 cath|current|3t1yL00/5-128 cath|current|3tvfO00/2-126 cath|current|3tvgO00/2-126 cath|current|3uxsL00/5-126 cath|current|3uxtL00/5-126 cath|current|3uydO00/5-129 cath|current|3uyfO00/5-129 cath|current|3uz3O00/2-126 cath|current|3uz4O00/5-129 cath|current|3uz6O00/2-126 cath|current|3uz7O00/2-126 cath|current|3uzgO00/2-126 cath|current|3uziO00/2-126 cath|current|3uzlO00/5-129 cath|current|3uzmO00/5-129 cath|current|3v22L00/5-126 cath|current|3v24L00/5-126 cath|current|3v26L00/5-126 cath|current|3v28L00/5-126 cath|current|3v2cL00/5-126 cath|current|3v2eL00/5-126 cath|current|3v6uL00/5-129 cath|current|3v6vL00/5-129 cath|current|4b3mL00/1-125 cath|current|4b3rL00/1-125 cath|current|4b3sL00/1-125 cath|current|4b3tL00/1-125 cath|current|4b8fL00/5-129 cath|current|4b8hL00/5-129 cath|current|4btcL00/5-129 cath|current|4bybL00/5-129 cath|current|4bydL00/5-129 cath|current|4cr1L00/5-129 cath|current|4dh9L00/5-126 cath|current|4dhbL00/5-126 cath|current|4ej9L00/5-129 cath|current|4ejaL00/5-129 cath|current|4kwzL00/5-129 cath|current|4kx1L00/5-129 cath|current|4nvuL00/5-126 cath|current|4nvwL00/5-126 cath|current|4nvyL00/5-126 cath|current|4nw0L00/5-126 cath|current|4qcmL00/5-126 cath|current|4qcoL00/5-126 cath|current|4qcqL00/5-126 cath|current|4qcsL00/5-126 cath|current|4qcuL00/5-126 cath|current|4qcwL00/5-126 cath|current|4qcyL00/5-126 cath|current|4qd0L00/5-126 cath|current|4qjtl00/5-126 cath|current|4rb5L00/5-126 cath|current|4rb7L00/5-126 cath|current|4rb9L00/5-126 cath|current|4rbbL00/5-126 cath|current|4rbdL00/5-126 cath|current|4rbfL00/5-126 cath|current|4rbhL00/5-126 cath|current|4rbjL00/5-126 cath|current|4w2aM00/5-129 cath|current|4w2cM00/5-129

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