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Domain assignment for 4xq8_B from Protein Data Bank

Domain architecture


Domain assignment details

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Strong hits

Sequence:  4xq8_B
Domain Number 1 Region: 149-333
Classification Level Classification E-value
Superfamily Nucleotidyltransferase 5.27e-82
Family DNA polymerase beta-like 0.000000504
Further Details:      
 
Domain Number 2 Region: 2-86
Classification Level Classification E-value
Superfamily DNA polymerase beta, N-terminal domain-like 7.25e-35
Family DNA polymerase beta, N-terminal domain-like 0.0000339
Further Details:      
 
Domain Number 3 Region: 89-143
Classification Level Classification E-value
Superfamily PsbU/PolX domain-like 6.22e-18
Family DNA polymerase beta-like, second domain 0.0000777
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 4xq8_B
Sequence length 334
Comment mol:protein length:334 DNA polymerase lambda
Sequence
AQPSSQKATNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACS
IPGIGKRMAEKIIEILESGHLRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLE
DIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSGLLCVACGSYRRG
KATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLPG
PGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTH
GCKVGPGRVLPTPTEKDVFRLLGLPYREPAERDW
Download sequence
Identical sequences 4xq8_A 4xq8_B 5ca7_A 5ca7_B 5iii_A 5iij_A 5iik_A 5iil_A 5iim_A 5iin_A 5iio_A 5iio_E 5iio_I 5iio_M

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