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Domain assignment for 5n1q_B from Protein Data Bank

Domain architecture


Domain assignment details

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Strong hits

Sequence:  5n1q_B
Domain Number 1 Region: 189-443
Classification Level Classification E-value
Superfamily Methyl-coenzyme M reductase alpha and beta chain C-terminal domain 4.88e-213
Family SCOPe 0.0039
Further Details:      
 
Domain Number 2 Region: 2-188
Classification Level Classification E-value
Superfamily Methyl-coenzyme M reductase subunits 3.32e-121
Family SCOPe 0.00064
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 5n1q_B
Sequence length 443
Comment mol:protein length:443 METHYL-COENZYME M REDUCTASE III FROM METHANOTHERMOCOCCUS THERMOLITHOTROPHICUS SUBUNIT BETA
Sequence
MVKYEDKISLYDAKGNLVEDGVPLEAISPLYNPTIKAMVKNIKRTVAVNLAGIENSLKTG
AIGGKGCKVPGRTLDLPIVENAEAIMDEVEKILRITPDDDTQLRAINDGKQLVVQVPSKR
LEVAAEYSVSMLNTAMALKEAIIKTFDVDLFDGSTIHAAIVGRYPQVMDYMGGNIASLLG
APSNMEGLGYALRNIMVNHYVATTKKNLMNAVAFASIMEQTAMFEMGDAIGSFERMHLLG
LAYQGLNSDNLVIDLVKANSKGTVGTVVASVVERALEDKVIVEDKSLESGFTMYKPADVA
KWNAYAAAGLVAAVIVNCGAARAAQNVASTILYYNDILEYETGLPGTDFGRAEGTAVGFS
FFSHSIYGGGGPGIFTGNHVVTRHSKGFAIPPVCAAMCADAGTQMFSPEKTSALVGAVYS
AIDEFREPLKYVIEGALEVKDKI
Download sequence
Identical sequences A0A247D6X4
WP_018153526.1.48476 5n1q_B 5n1q_E

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