SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 5vdu_A from Protein Data Bank

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  5vdu_A
Domain Number 1 Region: 9-238
Classification Level Classification E-value
Superfamily Nucleotidyltransferase 2.77e-80
Family 0.0000000212
Further Details:      
 
Domain Number 2 Region: 247-348
Classification Level Classification E-value
Superfamily PAP/OAS1 substrate-binding domain 3.02e-34
Family 0.00000803
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 5vdu_A
Sequence length 363
Comment mol:protein length:363 Cyclic GMP-AMP synthase
Sequence
mgasklravleklklsrddistaagmvkgvvdhlllrlkcdsafrgvgllntgsyyehvk
isapnefdvmfklevpriqleeysntrayyfvkfkrnpkenplsqflegeilsaskmlsk
frkiikeeindikdtdvimkrkrggspavtllisekisvditlalesksswpastqeglr
iqnwlsakvrkqlrlkpfylvpkhakegngfqeetwrlsfshiekeilnnhgksktccen
keekccrkdclklmkylleqlkerfkdkkhldkfssyhvktaffhvctqnpqdsqwdrkd
lglcfdncvtyflqclrteklenyfipefnlfssnlidkrskefltkqieyernnefpvf
def
Download sequence
Identical sequences 4o67_A 4o67_B 4o69_A 5vdo_A 5vdo_B 5vdp_A 5vdp_B 5vdq_A 5vdq_B 5vdr_A 5vdr_B 5vds_A 5vds_B 5vdt_A 5vdt_B 5vdu_A 5vdu_B 5vdv_A 5vdv_B 5vdw_A 5vdw_B

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]