SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 5xik_C from Protein Data Bank

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  5xik_C
Domain Number 1 Region: 10-276
Classification Level Classification E-value
Superfamily Class II aaRS and biotin synthetases 3.42e-79
Family Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain 0.000000162
Further Details:      
 
Domain Number 2 Region: 282-380
Classification Level Classification E-value
Superfamily Class II aaRS ABD-related 2.31e-36
Family Anticodon-binding domain of Class II aaRS 0.00015
Further Details:      
 
Domain Number 3 Region: 408-500
Classification Level Classification E-value
Superfamily C-terminal domain of ProRS 6.26e-19
Family C-terminal domain of ProRS 0.0039
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 5xik_C
Sequence length 500
Comment mol:protein length:500 Prolyl-tRNA synthetase (ProRS)
Sequence
GAMVTAKKDENFSEWYTQAIVRSEMIEYYDISGCYIMRPWAFHIWEKVQRFFDDEIKKMG
VENSYFPMFVSRHKLEKEKDHVEGFSPEVAWVTHYGDSPLPEKIAIRPTSETIMYPAYAK
WIRSHRDLPLKLNQWCSVVRWEFKQPTPFLRTREFLWQEGHTAHATEEEAWELVLDILEL
YRRWYEECLAVPVIKGEKSEGEKFAGGKKTTTVEAFIPENGRGIQAATSHLLGTNFAKMF
EIEFEDEEGHKRLVHQTSWGCTTRSLGVMIMTHGDDKGLVIPPRVASVQVVIIPILFKDE
NTGEILGKCRELKTMLEKADIRVRIDDRSNYTPGWKYNHWEVKGVPLRLELGPKDLAKGT
ARVVRRDTGEAYQISWADLAPKLLELMEGIQRSLFEKAKARLHEGIEKISTFDEVMPALN
RKHLVLAPWCEDPESEEQIKKETQKLSEIQAIEAGDSEQVMTGAMKTLCIPFDQPPMPEG
TKCFYTGKPAKRWTLWGRSY
Download sequence
Identical sequences 5xif_A 5xif_B 5xig_A 5xig_B 5xig_C 5xig_D 5xih_A 5xih_B 5xih_C 5xih_D 5xii_A 5xii_B 5xii_C 5xii_D 5xij_A 5xij_B 5xij_C 5xij_D 5xik_A 5xik_B 5xik_C 5xik_D 5xiq_A 5xiq_B 5xiq_C 5xiq_D

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]