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Domain assignment for 5xms_B from Protein Data Bank

Domain architecture


Domain assignment details

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Strong hits

Sequence:  5xms_B
Domain Number 1 Region: 5-442
Classification Level Classification E-value
Superfamily PLP-dependent transferases 3.41e-211
Family SCOPe 0.0000492
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 5xms_B
Sequence length 442
Comment mol:protein length:442 Serine hydroxymethyltransferase
Sequence
MFNNEPLEQIDKELHDILADEEKRQRETINLIASENLTNGAVRECLGNRVSNKYSEGYPK
KRYYGGNDFIDKIEELCQKRALEAFNVSDEEWGVNVQPLSGSAANVQALYALVGVKGKIM
GMHLCSGGHLTHGFFDEKKKVSITSDMFESKLYKCNSQGYVDLDAVREMALSFKPKVIIC
GYTSYPRDIDYQQFRQICDEVNAYLFADISHISSFVACNILNNPFLHADVVTTTTHKILR
GPRSALIFFNKKRNPGIEQKINSAVFPSFQGGPHNNKIAAVACQLKEVHSPAFKEYTQQV
LLNSKALAKALISKQIDLVTNGTDNHLIVVDLRKFSITGSKLQETCNAINVSLNKNTIPS
DVDCVSPSGVRIGTPAMTTRGAKEKDMEFIADVLARAIKITVDLQEQYGKKLVDFKKGLP
GNAQLQQLKQEVVTWAGALPFP
Download sequence
Identical sequences A0A0J9S3R9 A0A0J9SRM8 A0A0J9T4H6 A0A0J9W7T1 A0A1G4H5I1 A5K8L9
5855.PVX_100730 d4oyta_ d4oytb_ d4oytc_ d4pffa_ d4pffb_ d4pffc_ d4pfna_ d4pfnb_ d4pfnc_ d4tmra_ d4tmrb_ d4tmrc_ d4tn4a_ d4tn4b_ d4tn4c_ d5gvka_ d5gvkb_ d5gvkc_ d5gvla_ d5gvlb_ d5gvlc_ d5gvma_ d5gvmb_ d5gvmc_ d5gvna_ d5gvnb_ d5gvnc_ d5gvpa_ d5gvpb_ d5gvpc_ gb|PVX_100730 gi|156095715|ref|XP_001613892.1| XP_001613892.1.43797 4oyt_A 4oyt_B 4oyt_C 4pff_A 4pff_B 4pff_C 4pfn_A 4pfn_B 4pfn_C 4tmr_A 4tmr_B 4tmr_C 4tn4_A 4tn4_B 4tn4_C 5gvk_A 5gvk_B 5gvk_C 5gvl_A 5gvl_B 5gvl_C 5gvm_A 5gvm_B 5gvm_C 5gvn_A 5gvn_B 5gvn_C 5gvp_A 5gvp_B 5gvp_C 5xms_A 5xms_B 5xms_C 5xmt_A 5xmt_B 5xmt_C 5xmu_A 5xmu_B 5xmu_C 5xmv_A 5xmv_B 5xmv_C 5yfy_A 5yfy_B 5yfy_C 5yfz_A 5yfz_B 5yfz_C 5yg0_A 5yg0_B 5yg0_C 5yg1_A 5yg1_B 5yg1_C 5yg2_A 5yg2_B 5yg2_C 5yg3_A 5yg3_B 5yg3_C 5yg4_A 5yg4_B 5yg4_C

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