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Domain assignment for 5n0c_A from Protein Data Bank

Domain architecture


Domain assignment details

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Strong hits

Sequence:  5n0c_A
Domain Number 1 Region: 22-575
Classification Level Classification E-value
Superfamily Metalloproteases ("zincins"), catalytic domain 3.97e-197
Family SCOPe 0.0000000165
Further Details:      
 
Domain Number 2 Region: 579-904
Classification Level Classification E-value
Superfamily Clostridium neurotoxins, "coiled-coil" domain 2.71e-116
Family Clostridium neurotoxins, "coiled-coil" domain 0.000000164
Further Details:      
 
Domain Number 3 Region: 1132-1334
Classification Level Classification E-value
Superfamily STI-like 4.64e-68
Family Clostridium neurotoxins, C-terminal domain 0.000000018
Further Details:      
 
Domain Number 4 Region: 902-1116
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 5.46e-43
Family Clostridium neurotoxins, the second last domain 0.000000115
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 5n0c_A
Sequence length 1335
Comment mol:protein length:1335 Tetanus toxin
Sequence
MGSSHHHHHHSSGLVPRGSHMPITINNFRYSDPVNNDTIIMMEPPYCKGLDIYYKAFKIT
DRIWIVPERYEFGTKPEDFNPPSSLIEGASEYYDPNYLRTDSDKDRFLQTMVKLFNRIKN
NVAGEALLDKIINAIPYLGNSYSLLDKFDTNSNSVSFNLLEQDPSGATTKSAMLTNLIIF
GPGPVLNKNEVRGIVLRVDNKNYFPCRDGFGSIMQMAFCPEYVPTFDNVIENITSLTIGK
SKYFQDPALLLMHELIHVLHGLYGMQVSSHEIIPSKQEIYMQHTYPISAEELFTFGGQDA
NLISIDIKNDLYEKTLNDYKAIANKLSQVTSCNDPNIDIDSYKQIYQQKYQFDKDSNGQY
IVNEDKFQILYNSIMYGFTEIELGKKFNIKTALSFFSMNHDPVKIPNLLDDTIYNDTEGF
NIESKDLKSEYKGQNMRVNTNAFRNVDGSGLVSKLIGLCKKIIPPTNIRENLYNRTASLT
DLGGELCIKIKNEDLTFIAEKNSFSEEPFQDEIVSYNTKNKPLNFNYSLDKIIVDYNLQS
KITLPNDRTTPVTKGIPYAPEYKSNAASTIEIHNIDDNTIYQYLYAQKSPTTLQRITMTN
SVDDALINSTKIYSYFPSVISKVNQGAQGILFLQWVRDIIDDFTNESSQKTTIDKISDVS
TIVPYIGPALNIVKQGYEGNFIGALETTGVVLLLEYIPEITLPVIAALSIAESSTQKEKI
IKTIDNFLEKRYEKWIEVYKLVKAKWLGTVNTQFQKRSYQMYRSLEYQVDAIKKIIDYEY
KIYSGPDKEQIADEINNLKNKLEEKANKAMININIFMRESSRSFLVNQMINEAKKQLLEF
DTQSKNILMQYIKANSKFIGITELKKLESKINKVFSTPIPFSYSKNLDCWVDNEEDIDVI
LKKSTILNLDINNDIISDISGFNSSVITYPDAQLVPGINGKAIHLVNNESSEVIVHKAMD
IEYNDMFNNFTVSFWLRVPKVSASHLEQYGTNEYSIISSMKKHSLSIGSGWSVSLKGNNL
IWTLKDSAGEVRQITFRDLPDKFNAYLANKWVFITITNDRLSSANLYINGVLMGSAEITG
LGAIREDNNITLKLDRCNNNNQYVSIDKFRIFCKALNPKEIEKLYTSYLSITFLRDFWGN
PLRYDTEYYLIPVASSSKDVQLKNITDYMYLTNAPSYTNGKLNIYYRRLYNGLKFIIKRY
TPNNEIDSFVKSGDFIKLYVSYNNNEHIVGYPKDGNAFNNLDRILRVGYNAPGIPLYKKM
EAVKLRDLKTYSVQLKLYDDKNASLGLVGTHNGQIGNDPNRDILIASNWYFNHLKDKILG
CDWYFVPTDEGWTND
Download sequence
Identical sequences 5n0b_A 5n0c_A 5n0c_B

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