SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for PFE1070c from Plasmodium falciparum 3D7

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  PFE1070c
Domain Number 1 Region: 806-842
Classification Level Classification E-value
Superfamily RING/U-box 0.0000347
Family RING finger domain, C3HC4 0.014
Further Details:      
 
Weak hits

Sequence:  PFE1070c
Domain Number - Region: 1105-1138
Classification Level Classification E-value
Superfamily RING/U-box 0.00436
Family Zf-UBP 0.035
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) PFE1070c
Sequence length 1345
Comment PFE1070c conserved Plasmodium protein, unknown function 4724774:4729160 reverse MW:161905
Sequence
MFKKGPKNKKKLKCKTKKQANDSFCDSIIYPEKDMVDILRQKENLNKENLNKENLNEENL
NKEKLNEENLNEENCFLKKRTDENDNKQIINSNKYIKNELDNILLSPNEIYEKKNIQIND
KPILESSNNINVMDISENTDSIYGQNNNNDNNYVEPIKYEKKEYEICNSNSSVLKSASDS
NIDEQTNKNNDNYKKELSIILNNEEIIAYLKLNNKKDIDEKTNYLFPSIDIDHKSYSYLE
QGQDDYLIEMDKKIDKEIENFQNTFNHFYNLDNTNNKFDYNNDDNNNNDENNDNNNNNNN
NNNNDNNNNNYINEQNKEEITKNLNNNNILNTNENNVPNNMLVEKINDTYIGPKRQNKNH
IFTYKLKKNIYGKIQKQKKCSHSTTKTRHYTLLNNLFNINKKNILDDKKLQKHLRRKKKE
KYYIFPYNCGNTQIQLITGYIRCFKKYSLYKEFKKHEIRKNQKLNNEEVKKLNHINNMQN
EFEISLLLCVNVSNCISPSEFLEHFYPYDNFIFFLKVLNTKSNEEYMIYFLTFHIYVKQI
MKRSRTLTFFNMKKKKNVKLYLVKDITMNRISCINKKKKKKKFIINTDTFFEYNEKKRNN
RIEDSSLAYYHMRTKLYEIQKKAFINPLYIISQNKFQLSCAVCLEPLYSENLSKIISYIF
HNHFEKNKNITGIKKKKDADNIITIDKDKNVPSNLKFKYMYGKRDTTNFNNKENFNDSLT
FEKQYEDNKESFKNIPSDDILNKEIPCKEELEYNKEFKDFNKKKYNYYLHVIRYISSIQN
KYDSEIKNKWKKKQNNVDTIYDNNKVYNNVCINILCGHIFHSNCLKKCCFTSCPICRYKQ
YNYQIANCDICEKNKNVKICLFCCFIGCSINYEEQSKIKEKKLKEKHKFIKRKLYLVKRI
LYMFIRIVYPFLQTCHKIYLHGKCNMIQQLEKKKNKYIKNIEIEMNDIRYNTLKANNNKV
EQFPEIQSIKEEDKNRDKNVNKNIYEHMGSRKNKHRYSMNKFYKYIYIRNIKDRLQQNYI
VYNFKSNKIGIMNKVHFNISSYKKKKKIKKINTCNLYSVVLNNSTECTLLTYEKKKKEKK
KKKKKKSDNKNNKNKKYIKGYRKNNIDHAIEHFYHTNHNYFYDISKNSVYDYSSQLYTKT
IINFKKEDKENLNDMYSVNVTNHNDEKEIIDKKNIIMYIYEYNQLLCALLESQRNNFLES
ISDMKKNYENISKDNFNEANKIFKQLKTLQQKNENLKNDIKKKISTLHEKNINNENLKKE
LQNLELINKKLSDDQKKEINNYEMKAEEKKKIIKEKQQIIRELKQQIADLNFHKQAVSKF
SLSQETANSSFMIAEKITQNSRFKK
Download sequence
Identical sequences Q8I3P9
5833.PFE1070c-1 gi|124506347|ref|XP_001351771.1| gi|23504700|emb|CAD51578.1| PFE1070c XP_001351771.1.26446

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]