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Domain assignment for PFF0940c from Plasmodium falciparum 3D7

Domain architecture


Domain assignment details

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Strong hits

Sequence:  PFF0940c
Domain Number 1 Region: 475-704
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 2.55e-70
Family Extended AAA-ATPase domain 0.0000000263
Further Details:      
 
Domain Number 2 Region: 204-465
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 3.45e-67
Family Extended AAA-ATPase domain 0.00000000675
Further Details:      
 
Domain Number 3 Region: 111-203
Classification Level Classification E-value
Superfamily Cdc48 domain 2-like 1.01e-29
Family Cdc48 domain 2-like 0.0000158
Further Details:      
 
Domain Number 4 Region: 28-108
Classification Level Classification E-value
Superfamily ADC-like 2.86e-26
Family Cdc48 N-terminal domain-like 0.00015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) PFF0940c
Sequence length 828
Comment PFF0940c cell division cycle protein 48 homologue, putative 6013764:6016389 reverse MW:92388
Sequence
MEDNTDKKALVDENNGENKVPKKKNLSRLIVEEATNDDNSVVALNTKRMEELNFFRGDTI
IIKGKKRHSTICIILNDNDLDEGKIRINKVARKNLRVCLGDVVYVKSCPEIPYGKKIQVL
PIDDTIEGLAKDTLFEIFLKPYFNESYRPVKKGDLFLVRGGFMSVEFKVVEVDPDDFCIV
SPDTVIYYEGDPIKRDDEEKLDEIGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKP
PRGVLLYGPPGSGKTCIARAVANETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNS
PAIIFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPAL
RRFGRFDREIDIGVPDDNGRFEILRIHTKNMKLSPDVKLEELASNTHGFVGADLAQLCTE
AALTCIREKMDVIDLEDEIIDKEVLESMCVTQDHFNMALGTCNPSSLRETVVEVPNVKWD
DIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVASECSA
NFVSIKGPELLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIGTQRGSSLGDGSGAG
DRVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIYIPLPDLGARISIL
TAILRKCPVAENVPIDFLAQKTAGFSGADLAELCQRAARAAIRDAIDAEEMNKKSKLELS
NKKENEQNETNENDVHNKTEQQANDQQKNDDDNIKYEITRHHFKEGLAGARRSVSQADLI
KYDNFRIKFDPLYKTKTGGTGDDFIIDWPDEDNNDDTPAYVVDEDLYS
Download sequence
Identical sequences A0A024VAR9 A0A024VGH6 A0A024WTG1 A0A024XAP1 A0A060RV58 A0A0L1I5W1 A0A0L7K7I2 C6KT34 W4I6F3 W4IUZ9 W7F4M2 W7FYP8 W7JFU7 W7K9I0
PFHG_01099T0 PFF0940c 5833.PFF0940c-1 gi|225631753|emb|CAG25009.2| gi|296004694|ref|XP_966179.2| XP_012762007.1.2076 XP_966179.2.26446

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