SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for PF14_0215 from Plasmodium falciparum 3D7

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  PF14_0215
Domain Number 1 Region: 297-344
Classification Level Classification E-value
Superfamily RING/U-box 6.41e-19
Family RING finger domain, C3HC4 0.01
Further Details:      
 
Weak hits

Sequence:  PF14_0215
Domain Number - Region: 210-282
Classification Level Classification E-value
Superfamily Calcium ATPase, transmembrane domain M 0.0327
Family Calcium ATPase, transmembrane domain M 0.031
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) PF14_0215
Sequence length 510
Comment Hrd1 ubiquitin ligase, putative 20879032:20881304 forward MW:59786
Sequence
MELNMRLYILLSHLGLAFILMYAFMKYDEFYLAVVYLSTEKFPRTIIYNFFLMVFIVLCK
LLLNVFIGELRYLEVEQLIDNARAFIMDTILFLVLSKPTINGKEVSSIILIKYLSIIVIL
KAYHLVLYSRVSNIFELGVPRTRVLVKLFIFMCLLSIANLSLFTYFYKNSLKNSTMYLWL
FFECLSIFESCQISICKFFVNVIDLRSQNGLSSKATILFFLDILHDIMSLIIFLVFILVF
VLNNFSNLPLHMTADIIHVVKTLISRFKSFQKYRELTKNIETKFANATEEELKEAGTCII
CRDDLKEGSKKLSCSHIFHVDCLKSWFIQQQTCPICRTEIKPYAKNEQNKSENDTTQKEK
QEEKIEQPTIQEIITKPNFLINDQHLYLNDTNVMGTLNINQQYYPPINKNINTKEQIKIL
MDLCNYYRELSLVCLKEIDKINHSSIPANVMLRNIYGSIHYNILNNMEDDEVQKYLNKIS
HIPQMKGLKEYIEKVLITDMKYTKDICSSL
Download sequence
Identical sequences A0A2I0C2W5 Q8ILM8
XP_001348389.2.26446 gi|255528805|gb|AAN36828.2| gi|258597712|ref|XP_001348389.2| PF14_0215

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]