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Domain assignment for gi|116254917|ref|YP_770752.1|NC_008382 from NCBI plasmid sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|116254917|ref|YP_770752.1|NC_008382
Domain Number 1 Region: 109-203
Classification Level Classification E-value
Superfamily KorB DNA-binding domain-like 1.57e-22
Family KorB DNA-binding domain-like 0.0022
Further Details:      
 
Domain Number 2 Region: 15-118
Classification Level Classification E-value
Superfamily ParB/Sulfiredoxin 0.00000000000855
Family ParB-like nuclease domain 0.0042
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|116254917|ref|YP_770752.1|NC_008382
Sequence length 710
Comment plasmid stabilisation protein [Rhizobium leguminosarum bv. viciae 3841 plasmid pRL7]
Sequence
MAQAIQKITLSAARDIPFNKLVLSQQNVRKIKAGVSIEDLAEDIAHRGLLTSLNVRPELD
GDGNETGVYRIPAGGRRYRALERLVAQKRLAKTAGVPCIVSKGETPEVEDSLAENVQRVS
LHPLDQFRAFQTLREQGLGEEEIAARFFVSVATVTQRLRLASVSPRLLDLYAEDEMTLEQ
IMAFSITNDHVRQEQVWDTISRSHSREPYYIRRLLTETAIRASDRRAVYVGIEAYEAAGG
VTMRDLFDQDQGGWLQDPALLEQLVMEKLKADADAIQVSEGWKWVEAAFDFPYGHTSGLR
RFYGEQAEMTEDELARYDATRARYDKLDAEYAEASEYSEATERKLEELGSELDRLNDRPY
VFEPQEVARGGVFVSLGAIGELKIERGFVRPEDEPKDEADPSTDGGDDHDAHDSARPVTG
AAGGEGTQPDEEDEAIKPLPDRLVLDLTAARTIALRNALANDPVIAFVAVLHAFVLKTFY
VYGSDSCLEVTLQSARFSQTPSLGDAVWAKEIDQRHDGWGQDLPKDPNDLWDFLIKLDEV
SRQALFAHCASLSVNAVIEPWNKRTRAIAHAEQLARSIGFDMVEVGWTPTADNYLGRVTK
AHILQAVREAKGYQAAELIGHLKKTDMAREAERLITGCGWLPEPLRMTVVDGISESDAVA
DDASVGSDEGETASKLPDLPAFLLDEPGTSDDDAGDKESGIDGEHLAAAE
Download sequence
Identical sequences Q1MA08
gi|116254917|ref|YP_770752.1|NC_008382 216596.pRL70007 WP_011654499.1.53928 gi|116254917|ref|YP_770752.1|

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