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Domain assignment for gi|120536987|ref|YP_957045.1|NC_008738 from NCBI plasmid sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|120536987|ref|YP_957045.1|NC_008738
Domain Number 1 Region: 21-368
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.98e-32
Family RecA protein-like (ATPase-domain) 0.0018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|120536987|ref|YP_957045.1|NC_008738
Sequence length 403
Comment type II secretion system protein E [Marinobacter hydrocarbonoclasticus VT8 plasmid pMAQU01]
Sequence
MVQKDSIPLINDEHPFTLEKWNDALIQLYEWGVDDILFQDGEALAVQRKGRIVTVGTRPM
DLETVEFVLNGMYKNSAAATLQKGEDHNFTYPVRKDRTTTYRFRVNATASMGMYSSPVGV
DITMRTIAQVPPTMVELKVPQELIDLLFPRTGIVIVGGATGSGKTTLLGSVIREILTDPV
GRRALTYESPIEFDYRAIPNRTGRIAQSDVYIMLRDYSHATANSLRRHPNDIILGEARDA
ETIEGAVHNAETGHRVYTTVHVNSVGEMLSRMAGVFPQGERSRALSGLIGSARTLIYQEL
VPTVDGGRTAIREYLSLDDQMRRTLYATDESRVTKVMTDLVDRYGRPLMRDVEDRYREGV
LSKATFERYQAELGGTGTEIVMSDSEQGEVLFGSEVADEAASC
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Identical sequences A1U811
351348.Maqu_4279 WP_011783223.1.7233 gi|120536987|ref|YP_957045.1|NC_008738 gi|120536987|ref|YP_957045.1|

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