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Domain assignment for gi|153930724|ref|YP_001393419.1|NC_009705 from NCBI plasmid sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|153930724|ref|YP_001393419.1|NC_009705
Domain Number 1 Region: 505-531,664-905
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.0000159
Family G proteins 0.074
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|153930724|ref|YP_001393419.1|NC_009705
Sequence length 1031
Comment putative type IV secretion system protein IcmB/DotO [Yersinia pseudotuberculosis IP 31758 plasmid plasmid_153kb]
Sequence
MSGKIEAILMHILTSLKNDVTDYCDIETVDANNSIVMMDGSLGTIVRFNGRKNVLGRSEY
SSFIRKLSSSIGVFFKGTGHQIQFIFYKDLDSKALLERAVRSQRVSADRLNLNLEDLIDE
TVEKNAGYVYLEECYMVFWSRPSLLDPIESKISQDEKNRFRKENNWPSTANAQNLLRPIS
YLMDRHESFVSKIVSDLSSKQFGCSVEVLNVSNALKEIKRRVYPEYTSDKWKPAIPFQEI
LTGELNGIPPRWKNNTNDTDKSEILYPNIAGQIMVSTSEIGKRDANRTAYDPLNDPTIIR
VGARFYAPLLIKTPPSKEENFANLFASLNGVETRNNNQRKSIPYSVSFMIESDGLGGTAF
KSIFANILSITSEINKNINLALKALRERKRDGEVITKLRMSVMTWADWNNAEQLVLRKSK
LWKVIEAWGDTSLMEKSGNPMTAFQTNCMGLTTKHIGPACPAPLEEALELMPLTRPASPY
INASTIYRSLDGKLMPWEIFSEIQSHWLTLISGKPGSGKSATINSRHIDACLLGGVERIP
WLGIIDIGISCEGSTNAISDALPDHLKHLVLYARLQNTESNCINPMDVHLGARYPLPKWR
EFIVNFITLLITPVERQGKPYEGMTSLVGSIVDEAYKLKDTLEKGQPNTYSEGEDLFVDK
AIKEAGLNVVENNTPYYDIVDMLFDKGFIYEAERAQRYAVPRLSDLATVLNTPELQAKFG
NFTSENNKILEAFNFGLLTASNEYMIFNSSTKFDIGSARIIALDLQDVVVKGSSPAQQQK
TALMYMIARQSFMKKVAFHTDDLPQINSRYLDYYRKLINELIDENKTFCMDEFHNTGGIP
QLTDQIFADSRESRKWKMEIILLSQKPEDFGTLSDIATTIIVMDSGTENTRAYLRENISL
SPVAESALINHCNGANADGCTFLAMIKTKSGDFTQLFTATLGPKRLWRLSTTAEDRKLRT
LLFNQMPRPQAINLLANKFPQGGCKAAVDMLKQNQEKTNKVFNDDEILDSVIEGLANQII
KEHQTLMTSNM
Download sequence
Identical sequences A0A0U1QTL8
349747.YpsIP31758_B0121 gi|153930724|ref|YP_001393419.1|NC_009705 WP_011988571.1.58543 gi|153930724|ref|YP_001393419.1|

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