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Domain assignment for gi|157418122|ref|YP_001481194.1|NC_009837 from NCBI plasmid sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|157418122|ref|YP_001481194.1|NC_009837
Domain Number 1 Region: 439-762
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.06e-37
Family Extended AAA-ATPase domain 0.073
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|157418122|ref|YP_001481194.1|NC_009837
Sequence length 875
Comment conjugal transfer ATP-binding protein TraC [Escherichia coli APEC O1 plasmid pAPEC-O1-ColBM]
Sequence
MNNPLEAVTQAVNSLVTALKLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDT
TMGFMLEAIPINGANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWS
GEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEME
NLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVED
SFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNVADNYSNLLNPELSISCP
FILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQS
SVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKG
LFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNY
NMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLRFNP
FANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFL
KNASDSEQYVESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGL
EDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTA
RRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPL
QRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGL
SIHEAVWQLAWKKSGPEMASLEAWLEEHEKYRSVA
Download sequence
Identical sequences A0A0H2XJ18 F0JXZ7 Q84A30
gi|157418122|ref|YP_001481194.1| WP_001064247.1.101865 WP_001064247.1.10705 WP_001064247.1.11068 WP_001064247.1.11844 WP_001064247.1.14616 WP_001064247.1.15377 WP_001064247.1.16745 WP_001064247.1.17920 WP_001064247.1.1896 WP_001064247.1.20536 WP_001064247.1.23005 WP_001064247.1.26609 WP_001064247.1.2712 WP_001064247.1.29876 WP_001064247.1.31429 WP_001064247.1.35963 WP_001064247.1.365 WP_001064247.1.36826 WP_001064247.1.37153 WP_001064247.1.39042 WP_001064247.1.39164 WP_001064247.1.41371 WP_001064247.1.42203 WP_001064247.1.42516 WP_001064247.1.43216 WP_001064247.1.44394 WP_001064247.1.44975 WP_001064247.1.50270 WP_001064247.1.62424 WP_001064247.1.6348 WP_001064247.1.64285 WP_001064247.1.6810 WP_001064247.1.69887 WP_001064247.1.74358 WP_001064247.1.75594 WP_001064247.1.75672 WP_001064247.1.76547 WP_001064247.1.76965 WP_001064247.1.78610 WP_001064247.1.82991 WP_001064247.1.88880 WP_001064247.1.92102 WP_001064247.1.95428 WP_001064247.1.97160 405955.APECO1_O1CoBM39 gi|157418122|ref|YP_001481194.1|NC_009837 gi|32469990|ref|NP_862929.1|NC_004998 gi|446986991|ref|WP_001064247.1|NZ_CM001144

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